Burkholderia phymatum STM815 |
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Putative Burkholderia phymatum STM815 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10594
| Sequence length: | GenBank #: | |
| Chromosome: | 8,623,829 bp | AAUG00000000 (NZ_AAUG00000000) |
| chromosome 1: | 3,479,187 bp | CP001043 (NC_010622) |
| chromosome 2: | 2,697,374 bp | CP001044 (NC_010623) |
| plasmid pBPHY01: | 1,904,893 bp | CP001045 (NC_010625) |
REBASE acronym: BphSTM
Org_num: 5060
All begin Bphy_, BphyDRAFT_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1916 | 325 aa conserved hypothetical protein | |||
| 1917 | M | M.Bce22E1III (70% identity) | M.BphSTMORF1917P | |
| 1918 | 228 aa hypothetical protein | |||
| 1919 | 169 aa hypothetical protein | |||
| 1920 | M | M.CpaUM1ORF29345P (76% identity) | M.BphSTMORF1920P | |
| 1921 | 65 aa hypothetical protein | |||
| 2139 | 107 aa hypothetical protein | |||
| 2140 | M | M.Bsp413ORFAP (92% identity) | CCWGG | M.BphSTMORF2140P |
| 2141 | V | V.Psa5ORF24745P (95% identity) | V.BphSTMORF2140P | |
| 2142 | PEBP family protein | |||
| chromosome 2 | ||||
| 3398 | phage terminase, small subunit, P27 family | |||
| 3399 | M | M.Pte17804ORF25300P (78% identity) | M1.BphSTMORF3399P | |
| 3400 | M | ParB domain protein nuclease | M2.BphSTMORF3399P | |
| 3401 | 238 aa hypothetical protein | |||
| 3421 | 90 aa hypothetical protein | |||
| 3422 | R | Bmu548ORF13805P (32% identity) | GACGTC | BphSTMORF3423P |
| 3423 | M | M.Rps1931ORF26200P (90% identity) | GACGTC | M.BphSTMORF3423P |
| 3424 | integrase family protein | |||
| 4374 | tryptophan synthase, beta subunit | |||
| 4375 | M | M.Psa5ORF17650P (91% identity) | M.BphSTMORF4375P | |
| 4376 | tryptophan synthase, alpha subunit | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3868 | 330 aa hypothetical protein | |||
| 3917 | R | CzhM4aMcrCP (69% identity) | BphSTMMcrCP | |
| 3869 | R | CzhM4aMcrBP (62% identity) | BphSTMMcrBP | |
| 3870 | 220 aa hypothetical protein | |||
| plasmid pBPHY01 | ||||
| 6870 | glycine betaine/L-proline ABC transporter, | |||
| 6871 | R | Psp26794Mrr2P (25% identity) | BphSTMMrrP | |
| 6872 | 562 aa hypothetical protein | |||
| 6931 | 320 aa conserved hypothetical protein | |||
| 6932 | R | CzhM4aMcrCP (69% identity) | BphSTMMcrCP | |
| 6933 | R | CzhM4aMcrBP (62% identity) | BphSTMMcrBP | |
| 6934 | 220 aa conserved hypothetical protein | |||