Salmonella enterica subsp. enterica serovar Thompson RM1986 |
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Putative Salmonella enterica subsp. enterica serovar Thompson RM1986 RM systems
Ref: Parker,C.T. et al. unpublished
REBASE ref # 20935
Complete sequence: 4,701,355 bp
GenBank #: CP012514
REBASE acronym: Sen1986
Org_num: 17041
All begin STho1986_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4441 | endoribonuclease SymE | |||
| 4442 | S | S.Spy5740I (100% identity) | AGANNNNNNNNCTGG | S.Sen1986ORF4443P |
| 4443 | M | M.Spy5740I (100% identity) | AGANNNNNNNNCTGG | M.Sen1986ORF4443P |
| 4444 | R | Spy5740IP (100% identity) | AGANNNNNNNNCTGG | Sen1986ORF4443P |
| 4445 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1991 | amino acid exporter | |||
| 1992 | V | V.StyUK1DcmP (100% identity) | V.Sen1986DcmP | |
| 1993 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen1986DcmP |
| 1994 | hydrolase | |||
| 3297 | DNA-binding protein Fis | |||
| 3298 | M | M.SenThORF2290P (100% identity) | ATGCAT | M.Sen1986ORF3298P |
| 3299 | periplasmic protein | |||
| 3394 | ribulose-phosphate 3-epimerase | |||
| 3395 | M | DNA adenine methylase | GATC | M.Sen1986DamP |
| 3396 | membrane protein | |||
| 4410 | 81 aa hypothetical protein | |||
| 4411 | M | M.Spy5740IV (100% identity) | GGTACC | M.Sen1986ORF4411P |
| 4412 | R | Spy5740IVP (100% identity) | GGTACC | Sen1986ORF4411P |
| 4413 | 239 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 391 | sugar transporter | |||
| 392 | M | M.Spy5740II (100% identity) | CAGAG | M.Sen1986ORF392P |
| ??? | R | Ssp15303ORFGP (99% identity) | CAGAG | Sen1986ORF392P |
| 394 | 33 aa hypothetical protein | |||