Gordonia species QH-11 |
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Putative Gordonia species QH-11 RM systems
Ref: Jin,D. et al. unpublished
REBASE ref # 20589
Complete sequence: 4,428,727 bp
GenBank #: CP011853
REBASE acronym: GspQH11
Org_num: 17033
All begin ACH46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17175 | 957 aa hypothetical protein | |||
| 17180 | R | NspWS12ORFAP (66% identity) | GspQH11ORF17205P | |
| 17185 | 99 aa hypothetical protein | |||
| 17190 | 63 aa hypothetical protein | |||
| 17195 | restriction endonuclease | |||
| 17200 | S | S.Nsp027ORF15455P (39% identity) | S.GspQH11ORF17205P | |
| 17205 | M | M.Dsp413ORF13150P (79% identity) | M.GspQH11ORF17205P | |
| 17210 | 172 aa hypothetical protein | |||
| 20460 | 667 aa hypothetical protein | |||
| 20465 | M | M.GitC017ORF8240P (82% identity) | M.GspQH11ORF20465P | |
| ??? | S | S.Cdi8392ORF2206P (31% identity) | S.GspQH11ORF20465P | |
| 20475 | 365 aa hypothetical protein | |||
| 20480 | 224 aa hypothetical protein | |||
| 20485 | R | GitC017ORF8240P (76% identity) | GspQH11ORF20465P | |
| 20490 | 243 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4865 | hydrolase | |||
| 4870 | R | R2.ScoAm1ORFDP (27% identity) | GspQH11ORF4875P | |
| 4875 | M | M.GitC017ORF5735P (70% identity) | GCCGGC | M.GspQH11ORF4875P |
| 4880 | 3-hydroxyacyl-CoA dehydrogenase | |||
| 13475 | helicase | |||
| 13480 | RM | Rho831ORF8615P (65% identity) | GspQH11ORF13480P | |
| ??? | class I SAM-dependent DNA methyltransferase | |||
| 13480 | restriction endonuclease subunit M | |||
| ??? | RM | class I SAM-dependent DNA methyltransferase | GspQH11ORFAP | |
| 20115 | transposase | |||
| 20120 | RM | PspR16ORFBP (48% identity) | GspQH11ORF20120P | |
| 20125 | 439 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7430 | 105 aa hypothetical protein | |||
| 7435 | R | MspMYC017ORF14410P (58% identity) | GspQH11ORF7440P | |
| 7440 | M | M.Asp316ORF2772P (30% identity) | M.GspQH11ORF7440P | |
| 7445 | Fic family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17190 | 63 aa hypothetical protein | |||
| 17195 | R | BsqMMrrP (60% identity) | GspQH11MrrP | |
| 17200 | restriction endonuclease subunit S | |||