Escherichia coli MC1061 |
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Putative Escherichia coli MC1061 RM systems
Ref: Haldenby,Sam. et al. unpublished
REBASE ref # 20616
Complete sequence: 5,027,063 bp
GenBank #: LN877770
REBASE acronym: Eco1061
Org_num: 17071
All begin BN1843_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3820 | 113 aa hypothetical protein | |||
| ??? | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco1061ORF3840P |
| 3840 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco1061ORF3840P |
| 3850 | R | EcoWF55T2ORF18815P (100% identity) | AACNNNNNNGTGC | Eco1061ORF3840P |
| 3860 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23970 | Permease of the drug/metabolite transporter | |||
| 23980 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco1061DcmP |
| 23990 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1061DcmP |
| 24000 | metal-dependent phosphohydrolase | |||
| 28720 | antirepressor protein | |||
| ??? | M | M.EcoX21ORFCP (100% identity) | GATC | M.Eco1061ORF28730P |
| 28740 | Protein NinB | |||
| 38470 | DNA-binding protein Fis | |||
| 38480 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco1061ORF38480P |
| 38490 | periplasmic protein | |||
| 39700 | Ribulose-phosphate 3-epimerase | |||
| 39710 | M | Methyl-directed repair DNA adenine methylase | GATC | M.Eco1061DamP |
| 39720 | DamX, an inner membrane protein involved in bile | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3780 | helicase related protein | |||
| ??? | R | SenHNK130McrCP (100% identity) | Eco1061McrCP | |
| ??? | R | EcotolCMcrBP (100% identity) | Eco1061McrBP | |
| 3820 | 113 aa hypothetical protein | |||
| 3850 | Type I restriction-modification | |||
| 3860 | R | SenHNK130MrrP (100% identity) | Eco1061MrrP | |
| 3870 | metal chaperone, involved in Zn | |||