Salmonella enterica subsp. enterica serovar Typhi B/SF/13/03/195 |
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Putative Salmonella enterica subsp. enterica serovar Typhi B/SF/13/03/195 RM systems
Ref: Muhamad Harish,S. et al. unpublished
REBASE ref # 20978
Complete sequence: 4,798,993 bp
GenBank #: CP012151
REBASE acronym: Sen195
Org_num: 17037
All begin ACT04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20695 | restriction endonuclease | |||
| 20700 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen195ORF20705P |
| 20705 | M | M.StyTORF4575P (88% identity) | GAANNNNNNNNTCGC | M.Sen195ORF20705P |
| 20710 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen195ORF20705P |
| 20715 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1470 | ribulose-phosphate 3-epimerase | |||
| 1475 | M | DNA adenine methylase | GATC | M.Sen195DamP |
| 1480 | cell division protein DamX | |||
| 3520 | membrane protein | |||
| 3525 | M | methyltransferase | ATGCAT | M.Sen195II |
| 3530 | Fis family transcriptional regulator | |||
| 10420 | 79 aa hypothetical protein | |||
| 10425 | M | M.StyTORF1926P (100% identity) | GATC | M.Sen195ORF10425P |
| 10430 | DGQHR domain protein | |||
| 10485 | bacteriophage protein | |||
| 10490 | M | M.StyTORF1914P (100% identity) | M.Sen195ORF10490P | |
| 10495 | 190 aa hypothetical protein | |||
| 15705 | multidrug DMT transporter | |||
| 15710 | V | V.StyTDcmP (100% identity) | CCWGG | V.Sen195DcmP |
| 15715 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen195Dcm |
| 15720 | hydrolase | |||
| 21930 | 3-5 exonuclease | |||
| 21935 | M | M.StyTORF4329P (100% identity) | GATC | M.Sen195ORF21935P |
| 21940 | endonuclease | |||
| 23585 | pseudogene | |||
| 23590 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen195ORF23590P |
| 23595 | endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7495 | sugar transporter | |||
| 7500 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen195I |
| 7505 | R | StyTORF2507P (99% identity) | CAGAG | Sen195IP |
| 7510 | 33 aa hypothetical protein | |||
| 15775 | pseudogene | |||
| 15780 | M | M.SenUJ816AORFEP (100% identity) | CCGAG | M.Sen195ORF15780P |
| 15785 | R | SenUJ816AORFEP (100% identity) | CCGAG | Sen195ORF15780P |
| 15790 | type IV pilin | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20690 | membrane protein | |||
| 20695 | R | StyTMrrP (100% identity) | Sen195MrrP | |
| 20700 | DEAD/DEAH box helicase | |||