Lactobacillus plantarum HFC8 |
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Putative Lactobacillus plantarum HFC8 RM systems
Ref: Kumari,M. et al. unpublished
REBASE ref # 20947
| Sequence length: | GenBank #: | |
| Chromosome: | 3,067,675 bp | CP012650 |
| plasmid pMK02: | 56,046 bp | CP012655 |
| plasmid pMK03: | 49,656 bp | CP012651 |
| plasmid pMK06: | 29,950 bp | CP012660 |
REBASE acronym: Lpl8
Org_num: 17044
All begin AN634_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12385 | peptidase | |||
| 12390 | R | LplLp6ORF3475P (99% identity) | Lpl8ORF12400P | |
| 12395 | transposase | |||
| 12400 | M | M.LplZX028ORF4070P (92% identity) | M.Lpl8ORF12400P | |
| 12405 | S | S1.LplZFM9ORF4155P (45% identity) | S1.Lpl8ORF12400P | |
| 12410 | transposase | |||
| 12415 | S | S3.LplLL441ORF3190P (78% identity) | S2.Lpl8ORF12400P | |
| 12420 | integrase | |||
| 12425 | S | S1.LplLp6ORF3475P (40% identity) | S3.Lpl8ORF12400P | |
| 12430 | S | S1.LplE2C5ORF13135P (100% identity) | S4.Lpl8ORF12400P | |
| 12435 | nickel transporter | |||
| plasmid pMK03 | ||||
| 14630 | 214 aa hypothetical protein | |||
| ??? | S | S.HbaNS1ORF5490P (55% identity) | S2.Lpl8ORF14630P | |
| 14640 | PemK family protein | |||
| 14825 | 214 aa hypothetical protein | |||
| 14830 | S | 79 aa hypothetical protein | S2.Lpl8ORF14825P | |
| 14835 | S | S.LlaW12I (48% identity) | S3.Lpl8ORF14825P | |
| 14840 | PemK family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14120 | 106 aa hypothetical protein | |||
| 14125 | M | M.Lsp15475ORF62P (83% identity) | M.Lpl8ORF14125P | |
| 14130 | 125 aa hypothetical protein | |||
| plasmid pMK02 | ||||
| 15340 | topoisomerase I | |||
| 15345 | M | M.LplSS6ORF14645P (99% identity) | M.Lpl8ORF15345P | |
| 15350 | 801 aa hypothetical protein | |||
| plasmid pMK06 | ||||
| 16360 | replication protein RepB | |||
| 16365 | M | M1.Lpl8ORF16460P (100% identity) | GCATC | M1.Lpl8ORF16365P |
| 16370 | M | M2.Lpl8ORF16460P (100% identity) | GCATC | M2.Lpl8ORF16365P |
| 16375 | AlwI family restriction endonuclease | |||
| 16455 | replication protein RepB | |||
| 16460 | M | M1.Lpl8ORF16365P (100% identity) | GCATC | M1.Lpl8ORF16460P |
| 16465 | M | M2.Lpl8ORF16365P (100% identity) | GCATC | M2.Lpl8ORF16460P |
| ??? | R | Lpl8ORF16365P (19% identity) | GCATC | Lpl8ORF16460P |
| 16475 | 91 aa hypothetical protein | |||