Fusobacterium nucleatum subsp. vincentii ChDC F8 |
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Putative Fusobacterium nucleatum subsp. vincentii ChDC F8 RM systems
Ref: Kook,J.-K. et al. unpublished
REBASE ref # 20383
Complete sequence: 2,038,535 bp
GenBank #: CP012714
REBASE acronym: FnuF8
Org_num: 11920
All begin RN99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1395 | 3,5-cyclic-nucleotide phosphodiesterase | |||
| 1400 | M | M.Fnu2880I (100% identity) | M.FnuF8ORFFP | |
| 1405 | ATP-dependent DNA helicase RecG | |||
| 1410 | S | S1.Fnu2880I (66% identity) | S.FnuF8ORFFP | |
| 1415 | R | Fnu2880IP (100% identity) | FnuF8ORFFP | |
| 1420 | MATE family efflux transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3685 | tRNA (uracil-5-)-methyltransferase | |||
| 3690 | M | M.Fnu2880ORF5535P (100% identity) | GATC | M.FnuF8ORFEP |
| 3695 | DNA topoisomerase I | |||
| 8630 | adenylosuccinate synthetase | |||
| 8635 | R | Fnu2880ORF1420P (100% identity) | GGCC | FnuF8ORFDP |
| 8640 | M | M.Fnu2880ORF1420P (100% identity) | GGCC | M.FnuF8ORFDP |
| 8645 | 2, 3-cyclic nucleotide 2-phosphodiesterase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6335 | phosphoribosyl transferase | |||
| ??? | R | FnuF8ORFCP (100% identity) | FnuF8ORF6345P | |
| 6345 | M | M2.FnuM3739ORF10570P (83% identity) | M.FnuF8ORF6345P | |
| 6355 | 502 aa hypothetical protein | |||
| 6360 | 298 aa hypothetical protein | |||
| 6365 | M | M1.Fnu2988ORF2640P (100% identity) | M.FnuF8ORF6365P | |
| 6370 | site-specific DNA-methyltransferase (Type III | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9425 | 484 aa hypothetical protein | |||
| 9430 | R | Fnu2880McrBP (100% identity) | FnuF8McrBP | |
| 9435 | R | Fnu2880McrCP (100% identity) | FnuF8McrCP | |
| 9440 | CopG family transcriptional regulator | |||