Salmonella enterica subsp. enterica serovar Typhimurium 33676 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium 33676 RM systems
Ref: Vinuesa,P. et al. unpublished
REBASE ref # 20969
| Sequence length: | GenBank #: | |
| Chromosome: | 4,809,574 bp | CP012681 |
| plasmid p33673_IncF: | 112,639 bp | CP012683 |
REBASE acronym: Sen33676
Org_num: 17048
All begin SE15cs_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4666 | endoribonuclease SymE | |||
| 4667 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen33676ORF4669P |
| 4669 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen33676ORF4669P |
| 4670 | R | StyUK1IIP (99% identity) | GAGNNNNNNRTAYG | Sen33676ORF4669P |
| 4671 | restriction endonuclease | |||
| plasmid p33673_IncF | ||||
| 4986 | antitoxin Phd | |||
| ??? | M | M.SenceORFJP (100% identity) | CRTAYNNNNNNCTC | M.Sen33676ORF4987P |
| 4988 | S | S.SenceORFJP (100% identity) | CRTAYNNNNNNCTC | S.Sen33676ORF4987P |
| 4989 | R | SenceORFJP (100% identity) | CRTAYNNNNNNCTC | Sen33676ORF4987P |
| 4990 | IS1 transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2087 | inner membrane transporter yedA | |||
| 2088 | V | V.StyUK1DcmP (100% identity) | V.Sen33676DcmP | |
| 2089 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen33676DcmP |
| 2090 | hydrolase | |||
| 2743 | 303 aa hypothetical protein | |||
| 2744 | M | M.SenYU39ORF2843P (100% identity) | M.Sen33676ORF2744P | |
| 2745 | 260 aa hypothetical protein | |||
| 3493 | DNA-binding protein Fis | |||
| 3494 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33676ORF3494P |
| 3495 | 54 aa hypothetical protein | |||
| 3595 | ribulose-phosphate 3-epimerase | |||
| 3596 | M | M.StyTDamP (100% identity) | GATC | M.Sen33676DamP |
| 3597 | DamX protein | |||
| 4633 | AAA domain protein | |||
| 4634 | RM | StyUK1IV (100% identity) | GATCAG | Sen33676ORF4634P |
| 4635 | 1213 aa hypothetical protein | |||
| plasmid p33673_IncF | ||||
| 5017 | 308 aa hypothetical protein | |||
| 5018 | M | M.UbapRSB107ORFAP (100% identity) | M.Sen33676ORF5018P | |
| 5019 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 437 | sialic acid transporter | |||
| 438 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen33676ORF438P |
| 439 | R | Sen943IP (99% identity) | CAGAG | Sen33676ORF438P |
| 440 | DNA restriction enzyme | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4670 | type I restriction enzyme EcoKI subunit R | |||
| 4671 | R | StyUK1MrrP (100% identity) | Sen33676MrrP | |
| 4672 | 95 aa hypothetical protein | |||