Pseudomonas fluorescens AU11706 |
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Putative Pseudomonas fluorescens AU11706 RM systems
Ref: Scales,B.S. et al. Genome Announc 3 (4), e00837-15 (2015)
REBASE ref # 20304
Contig set: 7,256,896 bp
GenBank #: LCZB00000000 (NZ_LCZB00000000)
REBASE acronym: Pfl11706
Org_num: 16904
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1 | M | M.PflS613ORF5118P (88% identity) | M.Pfl11706ORFEP | |
| 4 | S | S.PflS613ORF5118P (94% identity) | S.Pfl11706ORFEP | |
| 5 | 103 aa hypothetical protein | |||
| 7 | 160 aa hypothetical protein | |||
| 8 | 133 aa hypothetical protein | |||
| 9 | 124 aa hypothetical protein | |||
| 10 | 136 aa hypothetical protein | |||
| 11 | R | PchGP72ORFAP (99% identity) | Pfl11706ORFEP | |
| 17 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | RM | Psp00428ORFEP (72% identity) | Pfl11706ORFHP | |
| 10 | 73 aa hypothetical protein | |||
| 8 | 73 aa hypothetical protein | |||
| 9 | M | M.PspJS425ORF29130P (99% identity) | M.Pfl11706ORFBP | |
| 17 | 70 aa hypothetical protein | |||
| 24 | 116 aa hypothetical protein | |||
| 25 | RM | PmaJR1ORFCP (57% identity) | Pfl11706ORFJBP | |
| 27 | Reverse transcriptase | |||
| 28 | RM | PmaJR1ORFDP (90% identity) | Pfl11706ORFJAP | |
| 32 | 1185 aa hypothetical protein | |||
| 119 | nucleoid-associated protein | |||
| 123 | M | M.PpuCSV86ORF13860P (93% identity) | M.Pfl11706ORFFP | |
| 125 | 196 aa hypothetical protein | |||
| 356 | 96 aa hypothetical protein | |||
| 358 | M | M1.Psp3S1ORF10175P (96% identity) | M.Pfl11706ORFDP | |
| 359 | 68 aa hypothetical protein | |||
| 332 | 921 aa hypothetical protein | |||
| 335 | RM | Ppu1456ORF4949P (70% identity) | Pfl11706ORFCP | |
| 341 | ATPase | |||
| 820 | 111 aa hypothetical protein | |||
| 822 | M | M.PaePA83III (99% identity) | GTCGAC | M.Pfl11706ORFGP |
| 826 | R | Pmo1ORF3875P (98% identity) | GTCGAC | Pfl11706ORFGP |
| 829 | integrase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 43 | 264 aa hypothetical protein | |||
| ??? | M | M.Ppu495ORF21255P (100% identity) | M.Pfl11706ORFAP | |
| 52 | R | SspSKA14ORFFP (100% identity) | Pfl11706ORFAP | |
| 58 | 65 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11 | restriction endonuclease subunit R | |||
| 17 | R | PspI1Mrr2P (90% identity) | Pfl11706MrrP | |
| 20 | 199 aa hypothetical protein | |||