Escherichia coli 36708 |
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Putative Escherichia coli 36708 RM systems
Ref: Delannoy,S. et al. Genome Announc 3 (4), e00852-15 (2015)
REBASE ref # 20298
Contig set: 5,525,853 bp
GenBank #: LDXG00000000 (NZ_LDXG00000000)
REBASE acronym: Eco36708
Org_num: 16929
All begin ABE93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2905 | endoribonuclease SymE | |||
| 2910 | S | S.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | S.Eco36708ORF2915P |
| ??? | M | M.EcoSO179ORF25115P (100% identity) | TACNNNNNNNRTRTC | M.Eco36708ORF2915P |
| 2920 | R | EcosLF82ORF3455P (100% identity) | TACNNNNNNNRTRTC | Eco36708ORF2915P |
| 2925 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 26945 | ninB protein | |||
| 26950 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco36708ORF26950P |
| 26955 | protein ninE | |||
| 27090 | M | M.EcoSO179ORF21175P (99% identity) | M.Eco36708ORF27090P | |
| 27095 | TrmB family transcriptional regulator | |||
| 7965 | regulator | |||
| 7970 | M | M.Esp10290ORF1290P (100% identity) | GATC | M.Eco36708ORF7970P |
| 7975 | 70 aa hypothetical protein | |||
| 28220 | LexA family transcriptional regulator | |||
| 28225 | M | M.EcoSO179ORF27120P (100% identity) | GATC | M.Eco36708ORF28225P |
| 28230 | 162 aa hypothetical protein | |||
| 28025 | 162 aa hypothetical protein | |||
| 28030 | M | M.EcoSTEC411ORF14855P (100% identity) | GATC | M.Eco36708ORF28030P |
| 28035 | LexA family transcriptional regulator | |||
| 19735 | 59 aa hypothetical protein | |||
| 19740 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco36708ORF19740P |
| 19745 | Fis family transcriptional regulator | |||
| 27370 | repressor | |||
| 27375 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco36708ORF27375P |
| 27380 | R | Sso1099IP (100% identity) | CTGCAG | Eco36708ORF27375P |
| 27385 | 215 aa hypothetical protein | |||
| 125 | 63 aa hypothetical protein | |||
| 145 | M | M.EcoMBT5ORF29545P (100% identity) | M.Eco36708ORF145P | |
| 150 | DNA recombinase | |||
| 4625 | ribulose-phosphate 3-epimerase | |||
| 4630 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco36708DamP |
| 4635 | cell division protein DamX | |||
| 22080 | ATPase | |||
| ??? | M | M.EcoSO179ORF27060P (100% identity) | M.Eco36708ORF22085P | |
| 22090 | 166 aa hypothetical protein | |||
| 1045 | multidrug DMT transporter | |||
| 1050 | V | V.SflSTLE3DcmP (100% identity) | V.Eco36708DcmP | |
| 1055 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco36708DcmP |
| 1060 | hydrolase, partial | |||