Pectobacterium carotovorum subsp. carotovorum UGC32 |
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Putative Pectobacterium carotovorum subsp. carotovorum UGC32 RM systems
Ref: Panda,P. et al. Genome Announc 3 (4), e00874-15 (2015)
REBASE ref # 20280
Contig set: 4,797,741 bp
GenBank #: AODU00000000 (NZ_AODU00000000)
REBASE acronym: PcaUGC32
Org_num: 16861
All begin G033_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2100 | pseudogene | |||
| 2105 | M | M.ParYKXORF1985P (97% identity) | M.PcaUGC32ORF2105P | |
| 2110 | S | S.SmaBB31ORF11440P (87% identity) | S.PcaUGC32ORF2105P | |
| 2115 | R | Dso5647ORF8130P (97% identity) | PcaUGC32ORF2105P | |
| 2120 | 131 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2925 | CAAX protease | |||
| 2930 | RM | PatP1526ORF18370P (95% identity) | PcaUGC32ORF2930P | |
| 2935 | S | S.PatP1526ORF18370P (22% identity) | S1.PcaUGC32ORF2930P | |
| 2940 | S | S.PatP1526ORF18370P (42% identity) | S2.PcaUGC32ORF2930P | |
| 2945 | DNA-binding protein | |||
| 19020 | ribulose-phosphate 3-epimerase | |||
| 19025 | M | M.PpeF16ORFAP (100% identity) | GATC | M.PcaUGC32DamP |
| 19030 | 338 aa hypothetical protein | |||
| 20710 | type II restriction endonuclease | |||
| 20715 | M | M.PspLJ1ORFGP (97% identity) | CCWGG | M.PcaUGC32ORF20715P |
| 20720 | V | V.ParQJ316ORF80P (95% identity) | V.PcaUGC32ORF20715P | |
| 20725 | R | PveSR1ORF10720P (96% identity) | CCWGG | PcaUGC32ORF20715P |
| 20730 | sugar phosphatase | |||