Acinetobacter baumannii B8342 |
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Putative Acinetobacter baumannii B8342 RM systems
Ref: Vijaykumar,S. et al. Genome Announc 3 (4), e00925-15 (2015)
REBASE ref # 20242
| Sequence length: | GenBank #: | |
| Chromosome: | 3,947,826 bp | LFYZ00000000 (NZ_LFYZ00000000) |
| Chromosome: | 3,947,826 bp | CP021342 |
REBASE acronym: AbaB8342
Org_num: 16880
All begin AB895_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 908 | DDE superendonuclease family protein | |||
| 909 | R | 452 aa hypothetical protein | TTCANNNNNNTCC | AbaB8342IBP |
| 910 | transposase family protein | |||
| 911 | integrase core domain protein | |||
| 912 | R | type I site-specific deoxyribonuclease, HsdR | TTCANNNNNNTCC | AbaB8342IAP |
| 913 | 38 aa hypothetical protein | |||
| 914 | 38 aa hypothetical protein | |||
| 915 | 178 aa hypothetical protein | |||
| 916 | S | S.Aba11922ORF2785P (100% identity) | TTCANNNNNNTCC | S.AbaB8342I |
| 917 | M | M.Aba11922ORF2785P (99% identity) | TTCANNNNNNTCC | M.AbaB8342I |
| 918 | 257 aa hypothetical protein | |||
| Chromosome | ||||
| 908 | DDE superendonuclease family protein | |||
| 909 | R | 452 aa hypothetical protein | TTCANNNNNNTCC | AbaB8342IBP |
| 910 | transposase family protein | |||
| 911 | integrase core domain protein | |||
| 912 | R | type I site-specific deoxyribonuclease, HsdR | TTCANNNNNNTCC | AbaB8342IAP |
| 913 | 38 aa hypothetical protein | |||
| 914 | 38 aa hypothetical protein | |||
| 915 | 178 aa hypothetical protein | |||
| 916 | S | S.Aba11922ORF2785P (100% identity) | TTCANNNNNNTCC | S.AbaB8342I |
| 917 | M | M.Aba11922ORF2785P (99% identity) | TTCANNNNNNTCC | M.AbaB8342I |
| 918 | 257 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 39 | membrane protein | |||
| 40 | M | M.Aba97ORF6130P (100% identity) | M.AbaB8342ORF40P | |
| 41 | helix-turn-helix domain protein | |||
| 1721 | riboflavin biosynthesis protein RibD | |||
| 1722 | M | M.KpnKP59ORFAP (100% identity) | RAATTY | M.AbaB8342II |
| 1723 | riboflavin synthase, alpha subunit | |||
| 2650 | 1226 aa hypothetical protein | |||
| 2651 | RM | Ajo46ORFGP (89% identity) | CATTAG | AbaB8342IV |
| 2652 | 645 aa hypothetical protein | |||
| Chromosome | ||||
| 39 | membrane protein | |||
| 40 | M | M.Aba97ORF6130P (100% identity) | M.AbaB8342ORF40P | |
| 41 | helix-turn-helix domain protein | |||
| 1721 | riboflavin biosynthesis protein RibD | |||
| 1722 | M | M.KpnKP59ORFAP (100% identity) | RAATTY | M.AbaB8342II |
| 1723 | riboflavin synthase, alpha subunit | |||
| 2650 | 1226 aa hypothetical protein | |||
| 2651 | RM | Ajo46ORFGP (89% identity) | CATTAG | AbaB8342IV |
| 2652 | 645 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1251 | 502 aa hypothetical protein | |||
| 1252 | R | Aba1026IP (99% identity) | CGAGG | AbaB8342IIIP |
| 1253 | M | M.Aba1026I (99% identity) | CGAGG | M.AbaB8342III |
| 1254 | 382 aa hypothetical protein | |||