Dehalococcoides mccartyi IBARAKI |
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Putative Dehalococcoides mccartyi IBARAKI RM systems
Ref: Yohda,M. et al. unpublished
REBASE ref # 20369
Complete sequence: 1,451,056 bp
GenBank #: AP014563
REBASE acronym: DmcIB
Org_num: 16834
All begin IBK_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 66 | HNH endonuclease domain-containing protein | |||
| 67 | M | M.DmcCG3ORF1505P (63% identity) | CCGG | M.DmcIBORF67P |
| 68 | 383 aa hypothetical protein | |||
| 137 | 86 aa hypothetical protein | |||
| 138 | M | M.CnoNRS1ORF440P (46% identity) | CAYNNNNRTG | M.DmcIBORF138P |
| 139 | R | Tsp160ORF10715P (45% identity) | CAYNNNNRTG | DmcIBORF138P |
| 140 | C | C.EsaMIORFOP (63% identity) | C.DmcIBORF138P | |
| 141 | 301 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1051 | 258 aa hypothetical protein | |||
| 1052 | R | DmcYORF10100P (100% identity) | DmcIBORF1053P | |
| 1053 | M | M.DmcYORF10100P (98% identity) | M.DmcIBORF1053P | |
| 1054 | transposase IS3/IS911 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 140 | XRE family transcriptional regulator | |||
| 141 | R | Spa18645MrrP (45% identity) | DmcIBMrrP | |
| 142 | 766 aa hypothetical protein | |||