Burkholderia pseudomallei 982 |
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Putative Burkholderia pseudomallei 982 RM systems
Ref: Hong,K.W. unpublished
REBASE ref # 20366
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,028,032 bp | CP012576 |
| chromosome 2: | 3,156,645 bp | CP012577 |
REBASE acronym: Bps982
Org_num: 16827
All begin AMS56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3820 | 321 aa hypothetical protein | |||
| ??? | M | M.BpsV44ORF3360P (100% identity) | GTCANNNNNNTGG | M.Bps982II |
| ??? | S | S.BpsToORF31690P (100% identity) | GTCANNNNNNTGG | S.Bps982II |
| 3830 | R | BpsV44ORF3360P (100% identity) | GTCANNNNNNTGG | Bps982IIP |
| 3835 | 102 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1200 | 176 aa hypothetical protein | |||
| 1205 | M | M.BtlORF1338P (100% identity) | M.Bps982ORF1205P | |
| 1210 | baseplate assembly protein | |||
| 17145 | sigma70 factor RpoD | |||
| ??? | M | M.BpsP6ORF5460P (100% identity) | M.Bps982ORF17150P | |
| 17155 | transcriptional regulator | |||
| chromosome 2 | ||||
| 24825 | tryptophan synthase subunit alpha | |||
| 24830 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.Bps982III |
| 24835 | tryptophan synthase alpha chain | |||
| 25230 | 89 aa hypothetical protein | |||
| 25235 | M | M.BpsSORF1047P (35% identity) | M.Bps982ORF25235P | |
| 25240 | transposase | |||
| 25240 | transposase | |||
| ??? | M | M.Bth59ORFAP (58% identity) | YGGCCR | M.Bps982ORF25241P |
| 25245 | DNA helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1835 | 84 aa hypothetical protein | |||
| 1840 | R | BpsToORF420P (100% identity) | CACAG | Bps982IP |
| ??? | M | M.BspBGKORF17P (100% identity) | CACAG | M.Bps982I |
| 1850 | porin | |||
| 2570 | 218 aa hypothetical protein | |||
| 2575 | M | M.AfaD334ORF16725P (80% identity) | CAGATG | M.Bps982IV |
| 2580 | R | Tsp63ORFCP (70% identity) | CAGATG | Bps982IVP |
| 2585 | metallophosphatase | |||