Xylella fastidiosa M23 |
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Putative Xylella fastidiosa M23 RM systems
Ref: Chen,J. et al. unpublished
REBASE ref # 10567
Complete sequence: 2,535,690 bp
GenBank #: CP001011 (NC_010577)
REBASE acronym: XfaM23
Org_num: 5038
All begin XfasM23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 227 | aconitate hydratase 2 | |||
| ??? | R | XfaTORF241P (100% identity) | XfaM23ORF233P | |
| ??? | S | S.Xfav13ORF1230P (100% identity) | S.XfaM23ORF233P | |
| ??? | M | M.XfaWM11ORF1245P (100% identity) | M.XfaM23ORF233P | |
| 235 | pseudogene | |||
| 2174 | pseudogene | |||
| 2175 | R | Xfav13ORF11050P (100% identity) | XfaM23ORF2177P | |
| 2176 | S | S.Xfav13ORF11050P (100% identity) | S.XfaM23ORF2177P | |
| 2177 | M | M.Xfav13ORF11050P (100% identity) | M.XfaM23ORF2177P | |
| 2178 | 234 aa hypothetical protein | |||
| 2178 | 234 aa hypothetical protein | |||
| 2179 | R | Xfav13ORF11075P (100% identity) | XfaM23ORF2182P | |
| 2180 | S | S.Xfav13ORF11075P (100% identity) | S.XfaM23ORF2182P | |
| 2181 | 88 aa hypothetical protein | |||
| 2182 | M | M.Xfav13ORF11075P (100% identity) | M.XfaM23ORF2182P | |
| 2183 | Lysine exporter protein (LYSE/YGGA) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 605 | histidine kinase | |||
| 606 | M | M.Xfav13ORF3100P (100% identity) | GTCGAC | M.XfaM23ORF606P |
| 607 | R | R1.Xfav13ORF3100P (100% identity) | GTCGAC | XfaM23ORF606P |
| 608 | protein of unknown function DUF262 | |||
| 1125 | 50 aa hypothetical protein | |||
| ??? | M | M.Xfav13ORF5610P (100% identity) | GCATGC | M.XfaM23ORF1126P |
| 1128 | 190 aa conserved hypothetical protein | |||
| 1408 | phage-related lysozyme | |||
| 1409 | M | M.Xfav13ORF7095P (100% identity) | M.XfaM23ORF1409P | |
| 1410 | excinuclease ABC, C subunit | |||
| 1422 | protein tyrosine phosphatase | |||
| 1423 | M | M.Xfav13ORF7170P (100% identity) | M.XfaM23ORF1423P | |
| 1424 | plasmid maintenance system killer | |||
| 1699 | 156 aa hypothetical protein XFLM_02295 | |||
| 1700 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.XfaM23ORF1700P |
| 1701 | R | Xfav25ORF3130P (100% identity) | TTCGAA | XfaM23ORF1700P |
| 1702 | type IV pilin | |||
| 1739 | DNA primase | |||
| ??? | R | XfasORF3006P (100% identity) | CCSGG | XfaM23ORF1741P |
| ??? | M | M.XfaTORF1649P (100% identity) | CCSGG | M.XfaM23ORF1741P |
| 1743 | tryptophanyl-tRNA synthetase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 881 | Beta-ketoacyl-acyl-carrier-protein synthase I | |||
| 882 | M | M.Xfav13ORF4440P (100% identity) | M.XfaM23ORF882P | |
| 883 | 67 aa hypothetical protein | |||
| 884 | R | Xfav13ORF4440P (100% identity) | XfaM23ORF882P | |
| 885 | alpha/beta hydrolase fold | |||