Salmonella enterica subsp. enterica serovar Give CFSAN012622 |
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Putative Salmonella enterica subsp. enterica serovar Give CFSAN012622 RM systems
Ref: Wang,H. et al. Genome Announc 3 (4), e00726-15 (2015)
REBASE ref # 20030
| Sequence length: | GenBank #: | |
| Chromosome: | 4,735,685 bp | JOKK00000000 (NZ_JOKK00000000) |
| Chromosome: | 4,620,577 bp | CP075037 |
| plasmid pCFSAN012622: | 147,099 bp | CP075038 |
REBASE acronym: Sen12622
Org_num: 16721
All begin GJ28_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen12622ORFEP |
| ??? | M | M.Sen12622ORF22800AP (100% identity) | M.Sen12622ORFDP | |
| ??? | M | M.SspsA7DcmP (100% identity) | CCWGG | M.Sen12622DcmP |
| ??? | V | V.StyUK1DcmP (100% identity) | V.Sen12622DcmP | |
| Chromosome | ||||
| 1700 | cell division protein DamX | |||
| 1705 | M | M.StyTDamP (100% identity) | GATC | M.Sen12622DamP |
| 1710 | ribulose-phosphate 3-epimerase | |||
| 2195 | DUF2556 family protein | |||
| 2200 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen12622ORFEP |
| 2205 | DNA-binding transcriptional regulator Fis | |||
| 8510 | phosphohydrolase | |||
| 8515 | M | M.SspsA7DcmP (100% identity) | CCWGG | M.Sen12622DcmP |
| 8520 | V | V.StyUK1DcmP (100% identity) | V.Sen12622DcmP | |
| 8525 | drug/metabolite exporter YedA | |||
| 18955 | YebC/PmpR family DNA-binding transcriptional | |||
| 18960 | R | SspsA7ORF19355P (100% identity) | Sen12622ORF18960P | |
| 18965 | helicase | |||
| plasmid pCFSAN012622 | ||||
| 22795 | RepB family plasmid replication initiator | |||
| 22800 | M | M.Sen12622ORFDP (100% identity) | M.Sen12622ORF22800AP | |
| 22805 | tyrosine-type recombinase/integrase | |||
| 22810 | tyrosine-type recombinase/integrase | |||
| 22815 | tyrosine-type recombinase/integrase | |||
| 22820 | M | M.EcoR811ORFBP (25% identity) | M.Sen12622ORF22800BP | |
| 22825 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | SspsA7ORF19395P (99% identity) | CCGCTG | Sen12622ORFCP |
| ??? | M | M.SspsA7ORF19395P (100% identity) | CCGCTG | M.Sen12622ORFCP |
| ??? | R | SenWC80ORFAP (99% identity) | CAGAG | Sen12622ORFAP |
| ??? | M | M.SspsA7ORF16840P (100% identity) | CAGAG | M.Sen12622ORFAP |
| Chromosome | ||||
| 16720 | 33 aa hypothetical protein | |||
| 16725 | R | SspsA7ORF16840P (100% identity) | CAGAG | Sen12622ORF16730P |
| 16730 | M | M.SspsA7ORF16840P (100% identity) | CAGAG | M.Sen12622ORF16730P |
| 16735 | MFS transporter | |||
| 18995 | DEAD/DEAH box helicase | |||
| 19000 | M | M.SspsA7ORF19395P (100% identity) | CCGCTG | M.Sen12622ORFCP |
| 19005 | R | SspsA7ORF19395P (99% identity) | CCGCTG | Sen12622ORFCP |
| 19010 | 100 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | 278 aa hypothetical protein | GATC | M.Sen12622ORFBP |