Salmonella enterica subsp. enterica serovar Choleraesuis ATCC 10708 |
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Putative Salmonella enterica subsp. enterica serovar Choleraesuis ATCC 10708 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 21594
| Sequence length: | GenBank #: | |
| Chromosome: | 4,752,095 bp | CP012344 |
| plasmid pCFSAN000679_01: | 49,584 bp | CP012345 |
REBASE acronym: Sen10708
Org_num: 16669
All begin SEEC0708_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1800 | cell division protein DamX | |||
| 1805 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen10708DamP |
| 1810 | ribulose-phosphate 3-epimerase | |||
| 2285 | DUF2556 domain-containing protein | |||
| 2290 | M | M.SenTC177ORF2255P (100% identity) | ATGCAT | M.Sen10708ORF2290P |
| 2295 | Fis family transcriptional regulator | |||
| 2285 | 54 aa hypothetical protein | |||
| 2290 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.Sen10708II |
| 2295 | Fis family transcriptional regulator | |||
| 5540 | 75 aa hypothetical protein | |||
| 5545 | M | M.SenH3X1ORF5350P (100% identity) | GATC | M.Sen10708ORF5545P |
| 5550 | endonuclease | |||
| 7010 | 73 aa hypothetical protein | |||
| 7015 | M | M.Sen5750ORF4616P (100% identity) | TGGCCA | M.Sen10708ORF7015P |
| 7020 | 76 aa hypothetical protein | |||
| 9215 | phosphohydrolase | |||
| 9220 | M | M.SenZYXDcmP (100% identity) | CCWGG | M.Sen10708Dcm |
| 9225 | V | very short patch repair endonuclease | CCWGG | V.Sen10708DcmP |
| 9230 | drug/metabolite exporter YedA | |||
| 25825 | RusA family crossover junction | |||
| 25830 | M | M.SenTC177ORF13020P (100% identity) | M.Sen10708ORF25830P | |
| 25835 | PerC family transcriptional regulator | |||
| 15770 | nucleoside 2-deoxyribosyltransferase | |||
| 15775 | M | M.Sen5750ORF2796P (100% identity) | M.Sen10708ORF15775P | |
| 15780 | 181 aa hypothetical protein | |||
| 26950 | 697 aa hypothetical protein | |||
| 26955 | M | M.SenTC177ORF20135P (100% identity) | M.Sen10708ORF26955P | |
| 26960 | 121 aa hypothetical protein | |||
| 20005 | 238 aa hypothetical protein | |||
| 20010 | M | M.SinI (99% identity) | GGWCC | M.Sen10708ORF20010P |
| 20015 | R | SinI (100% identity) | GGWCC | Sen10708ORF20010P |
| 20020 | pseudogene | |||
| plasmid pCFSAN000679_01 | ||||
| 23930 | 62 aa hypothetical protein | |||
| 23935 | M | M.StyUK1ORFAP (100% identity) | M.Sen10708ORF23935P | |
| 23940 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17555 | 33 aa hypothetical protein | |||
| 17560 | R | SenTC177ORF17305P (100% identity) | CAGAG | Sen10708ORF17565P |
| 17565 | M | M.SensIBG7b4ORF17175P (100% identity) | CAGAG | M.Sen10708ORF17565P |
| 17570 | MFS transporter | |||
| 17555 | 33 aa hypothetical protein | |||
| ??? | R | SenWC81ORFAP (100% identity) | CAGAG | Sen10708IP |
| 17565 | M | M.SenWC81ORFAP (100% identity) | CAGAG | M.Sen10708I |
| 17570 | sugar transporter | |||