Desulfitobacterium hafniense PCS-S |
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Putative Desulfitobacterium hafniense PCS-S RM systems
Ref: Hornung,V.Bastian. unpublished
REBASE ref # 20083
Complete sequence: 5,594,916 bp
GenBank #: LK996017
REBASE acronym: DhaPCSS
Org_num: 16437
All begin DPCES_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 120 | 85 aa Hypothetical protein | |||
| 121 | M | M.DhaYORF44P (99% identity) | M.DhaPCSSORF121P | |
| 122 | 127 aa Hypothetical PA1492 domain | |||
| 150 | 190 aa Hypothetical protein | |||
| 151 | M | M.Oba2ORF4470P (99% identity) | M.DhaPCSSORF151P | |
| 152 | 110 aa Hypothetical protein | |||
| 155 | 77 aa Hypothetical protein | |||
| 156 | C | C.Oba2ORF4500P (100% identity) | C.DhaPCSSORF157P | |
| 157 | M | M1.Oba2ORF4500P (98% identity) | GGCGGA | M2.DhaPCSSORF157P |
| 158 | M | M2.Oba2ORF4500P (98% identity) | GGCGGA | M1.DhaPCSSORF157P |
| 159 | R | Oba2ORF4500P (96% identity) | GGCGGA | DhaPCSSORF157P |
| 160 | V | V.Oba2ORF4500P (96% identity) | V.DhaPCSSORF157P | |
| 161 | DNA repair ATPase | |||
| 329 | Agmatinase | |||
| 330 | M | M.DhaDORF179P (100% identity) | GATC | M.DhaPCSSORF330P |
| 331 | R | DhaYORF234P (98% identity) | GATC | DhaPCSSORF330P |
| 332 | Arginine decarboxylase | |||
| 779 | DEAD/DEAH box helicase domain protein | |||
| 780 | M | M.DhaDORF632P (100% identity) | M.DhaPCSSORF780P | |
| 781 | Conserved domain protein | |||
| 783 | EcsC family protein | |||
| 784 | C | C.DhaDORF638P (100% identity) | C.DhaPCSSORF786P | |
| 785 | Super II DNA/RNA helicase, SNF2 protein | |||
| 786 | M | M.DhaDORF638P (99% identity) | M.DhaPCSSORF786P | |
| 787 | ATPase (AAA+ super)-like protein | |||
| 789 | UvrD/REP helicase | |||
| 790 | M | M.DhaDORF642P (100% identity) | M.DhaPCSSORF790P | |
| 791 | R | Aha17939ORFCP (69% identity) | DhaPCSSORF790P | |
| 792 | 228 aa Hypothetical protein | |||
| 1381 | 238 aa Hypothetical protein | |||
| 1382 | M | M.Awo1030ORF35180P (65% identity) | TGGCCA | M.DhaPCSSORF1382P |
| 1383 | HNH endonuclease | |||
| 1531 | 110 aa Hypothetical protein | |||
| 1532 | M | M.Yfr2321ORF204970P (90% identity) | M.DhaPCSSORF1532P | |
| 1533 | 200 aa Hypothetical protein | |||
| 1661 | 216 aa Hypothetical protein | |||
| 1662 | M | M.DhaDORF2617P (99% identity) | M.DhaPCSSORF1662P | |
| 1663 | Reductive dehalogenase transcriptional | |||
| 3556 | 247 aa Hypothetical protein | |||
| 3557 | M | M.HcoHHORF1189P (64% identity) | M1.DhaPCSSORF3557P | |
| 3558 | M | M1.Dgi7213ORF4396P (92% identity) | M2.DhaPCSSORF3557P | |
| 3559 | Addiction module antitoxin, RelB/DinJ | |||
| 5011 | Sir2-like protein | |||
| 5012 | M | M.BamPP19ORF18580P (46% identity) | GGATCC | M.DhaPCSSORF5012P |
| 5013 | Uncharacterized conserved protein (DUF2293) | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14 | 44 aa Hypothetical protein | |||
| 15 | M | M.TfrDRI13ORF16630P (66% identity) | M.DhaPCSSORF15P | |
| 16 | R | Tph12270ORF7700P (84% identity) | DhaPCSSORF15P | |
| 17 | 324 aa Hypothetical protein | |||
| 1636 | 227 aa Hypothetical protein | |||
| 1637 | M | M.HmoORF3004P (49% identity) | M.DhaPCSSORF1637P | |
| 1638 | R | PbaAMB02ORF6340P (86% identity) | DhaPCSSORF1637P | |
| 1639 | 85 aa Hypothetical protein | |||