Escherichia coli upec-105 |
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Putative Escherichia coli upec-105 RM systems
Ref: Salipante,S.J. et al. Genome Res. (2014) In press
REBASE ref # 19145
Contig set: 5,182,453 bp
GenBank #: JSOV00000000 (NZ_JSOV00000000)
REBASE acronym: EcoU105
Org_num: 16380
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | 335 aa hypothetical protein HMPREF0986_00683 | |||
| ??? | M | M1.Eco126ORFBP (100% identity) | M1.EcoU105ORFFP | |
| ??? | M | M2.EcoSCB15ORF23165P (100% identity) | M2.EcoU105ORFFP | |
| ??? | S | S.SspPIBORF19375P (100% identity) | S.EcoU105ORFFP | |
| ??? | R | SspPIBORF19375P (100% identity) | EcoU105ORFFP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.SspPIBORF2440P (100% identity) | ATGCAT | M.EcoU105ORFAP |
| ??? | M | M.Sbo812ORFAP (100% identity) | GATC | M.EcoU105ORFBP |
| ??? | M | M.Sfl0030ORFCP (100% identity) | M.EcoU105ORFDP | |
| ??? | V | V.SspPIBDcmP (100% identity) | V.EcoU105DcmP | |
| ??? | M | M.SspPIBDcmP (100% identity) | CCWGG | M.EcoU105DcmP |
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.EcoU105ORFCP |