Geobacillus species LC300 |
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Putative Geobacillus species LC300 RM systems
Ref: Cordova,L.T. et al. unpublished
REBASE ref # 20169
| Sequence length: | GenBank #: | |
| Chromosome: | 3,494,216 bp | CP008903 |
| plasmid pGt35: | 38,364 bp | CP008904 |
REBASE acronym: Gsp300
Org_num: 16392
All begin IB49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 545 | 231 aa hypothetical protein | |||
| 550 | M | M2.Gst2ORF8745P (100% identity) | CCAANNNNNNTCG | M.Gsp300I |
| ??? | S | S2.Gst2ORF8745P (72% identity) | CCAANNNNNNTCG | S.Gsp300I |
| 560 | R | Gst2ORF8745P (99% identity) | CCAANNNNNNTCG | Gsp300IP |
| 565 | 62 aa hypothetical protein | |||
| 12065 | 96 aa hypothetical protein | |||
| 12070 | R | BmeSTB1ORF25790P (77% identity) | GTANNNNNNNNCTTC | Gsp300IIP |
| 12075 | M | M.BmeNi23ORF3510P (82% identity) | GTANNNNNNNNCTTC | M.Gsp300II |
| ??? | S | S.CocV2ORF27730P (53% identity) | GTANNNNNNNNCTTC | S.Gsp300II |
| 12090 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17170 | 219 aa hypothetical protein | |||
| 17175 | M | M.Gst2ORF6810P (46% identity) | M1.Gsp300ORF17175P | |
| 17180 | M | M.Gst2ORF6810P (43% identity) | M2.Gsp300ORF17175P | |
| 17185 | alkaline phosphatase | |||
| plasmid pGt35 | ||||
| 18545 | 134 aa hypothetical protein | |||
| 18550 | R | Gza12ORF17800P (99% identity) | GCWGC | Gsp300IVP |
| 18555 | M | M.Gza12ORF17800P (99% identity) | GCWGC | M.Gsp300IV |
| 18560 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17235 | 274 aa hypothetical protein | |||
| 17240 | M | M.GthN7ORF11940P (97% identity) | M.Gsp300ORF17240P | |
| 17245 | R | Gst12980ORF6260P (96% identity) | Gsp300ORF17240P | |
| 17255 | transposase | |||
| 17495 | ATPase AAA | |||
| 17500 | M | M.Gst53ORF1530P (97% identity) | GCCAT | M.Gsp300III |
| 17505 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17195 | pseudogene | |||
| 17200 | R | GspFW23MrrP (99% identity) | Gsp300MrrP | |
| 17205 | acetamidase | |||
| 17255 | transposase | |||
| 17265 | R | GspSah69MrrP (99% identity) | Gsp300Mrr2P | |
| 17270 | 77 aa hypothetical protein | |||