Putative Xylella fastidiosa M12 RM systems
Ref: Chen,J. et al. (in) AMERICAN PHYTOPATHOLOGICAL SOCIETY ABSTRACTS: S21; (2007)
REBASE ref # 11960
Complete sequence: 2,475,130 bp
GenBank #: CP000941 (NC_010513)
REBASE acronym: XfaM
Org_num: 5012
All begin Xfasm12_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
259 | 149 aa conserved hypothetical protein | |||
260 | R | XfaESVLORF1195P (93% identity) | XfaMORF263P | |
??? | S | S.XfaEM3ORF1215P (96% identity) | S.XfaMORF263P | |
??? | M | M.XfaRiv5ORF1215P (99% identity) | M.XfaMORF263P | |
265 | 140 aa hypothetical protein | |||
2266 | 85 aa hypothetical protein | |||
2267 | R | XfaRO8ORF10670P (100% identity) | XfaMORF2269P | |
2268 | S | S.XfaSyVAORF2553P (100% identity) | S.XfaMORF2269P | |
2269 | M | M.XfaG1ORF2260P (100% identity) | M.XfaMORF2269P | |
2270 | 269 aa hypothetical protein | |||
2270 | 269 aa hypothetical protein | |||
2271 | R | XfaRO8ORF10695P (100% identity) | XfaMORF2274P | |
2272 | S | S.XfaRO8ORF10695P (100% identity) | S.XfaMORF2274P | |
2273 | 88 aa hypothetical protein | |||
2274 | M | M.XfaY3CORF10835P (100% identity) | M.XfaMORF2274P | |
2275 | pseudogene | |||
2282 | 87 aa hypothetical protein XF2736 | |||
2283 | R | XfaSyVAORF2573P (100% identity) | XfaMORF2286P | |
2284 | pseudogene | |||
2285 | S | S.XfaSyVAORF2573P (100% identity) | S.XfaMORF2286P | |
2286 | M | M.XfaRO8ORF10765P (100% identity) | M.XfaMORF2286P | |
2287 | 136 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
419 | phage-related lysozyme | |||
420 | M | M.XfaRO8ORF1965P (100% identity) | M.XfaMORF420P | |
421 | HicB-related protein | |||
659 | transposase OrfB | |||
660 | M | M.XfasORF2772P (100% identity) | M.XfaMORF660P | |
661 | 132 aa conserved hypothetical protein | |||
1218 | pseudogene | |||
??? | M | M.XfaY3CORF5465P (66% identity) | GCATGC | M.XfaMORF1219P |
1220 | 190 aa conserved hypothetical protein | |||
1485 | 470 aa conserved hypothetical protein | |||
1486 | M | M.XfaRO8ORF6960P (100% identity) | M.XfaMORF1486P | |
1487 | phage-related lysozyme | |||
1669 | 65 aa hypothetical protein | |||
1670 | M | M.XfaY3CORF8005P (100% identity) | CGTACG | M.XfaMORF1670P |
1671 | R | XfaRO8ORF7860P (100% identity) | CGTACG | XfaMORF1670P |
1672 | 75 aa hypothetical protein | |||
1761 | 148 aa hypothetical protein | |||
1762 | M | M.XfaAORFC345P (97% identity) | GCATGC | M.XfaMORF1762P |
??? | R | XfaESVLORF8510P (94% identity) | GCATGC | XfaMORF1762P |
1764 | type IV pilin | |||
1807 | DNA primase | |||
1808 | R | XfaRiv5ORF8515P (100% identity) | CCSGG | XfaMORF1809P |
1809 | M | M.XfaY3CORF8660P (100% identity) | CCSGG | M.XfaMORF1809P |
1810 | pseudogene | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1003 | pseudogene | |||
1004 | M | M.XfaRO8ORF4680P (100% identity) | M.XfaMORF1004P | |
1005 | 72 aa conserved hypothetical protein | |||
1006 | R | XfaRO8ORF4680P (92% identity) | XfaMORF1004P | |
1007 | haloalkane dehalogenase |