Salmonella enterica subsp. enterica serovar Agona 01.O.05 |
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Putative Salmonella enterica subsp. enterica serovar Agona 01.O.05 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,789,641 bp
GenBank #: CATQ00000000 (NZ_CATQ00000000)
REBASE acronym: Sen01O02
Org_num: 16240
All begin SA01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3495 | protein TIR | |||
| 3496 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen01O02ORF3496P |
| 3497 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen01O02ORF3496P |
| 3498 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen01O02ORF3496P |
| 3499 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen01O02ORF3496P |
| 3500 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3479 | 97 aa hypothetical protein | |||
| 3480 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen01O02ORF3480P |
| 3481 | 670 aa hypothetical protein | |||
| 1393 | metal dependent phosphohydrolase | |||
| 1394 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen01O02DcmP |
| 1395 | V | very short patch repair protein | V.Sen01O02DcmP | |
| 1396 | carboxylate/amino acid/amine transporter | |||
| 1821 | periplasmic protein | |||
| 1822 | M | DNA methylase | ATGCAT | M.Sen01O02ORF1822P |
| 1823 | DNA-binding protein Fis | |||
| 4614 | protein DamX | |||
| 4615 | M | DNA adenine methylase | GATC | M.Sen01O02DamP |
| 4616 | ribulose-phosphate 3-epimerase | |||
| 659 | 113 aa hypothetical protein | |||
| 660 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen01O02ORF660P |
| 661 | bacteriophage replication gene A | |||
| 662 | 62 aa hypothetical protein | |||
| 663 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen01O02ORF663P |
| ??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen01O02ORF663P |
| 665 | pbsx family phage portal protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2155 | cyanide-insensitive oxidase CioA | |||
| 2156 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen01O02ORF2157P |
| 2157 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen01O02ORF2157P |
| 2158 | major facilitator superfamily MFS_1 | |||