Salmonella enterica subsp. enterica serovar Agona 03.O.05 |
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Putative Salmonella enterica subsp. enterica serovar Agona 03.O.05 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,882,497 bp
GenBank #: CATO00000000 (NZ_CATO00000000)
REBASE acronym: Sen03O05
Org_num: 16289
All begin SA03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3530 | protein TIR | |||
| 3531 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen03O05ORF3531P |
| 3532 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen03O05ORF3531P |
| 3533 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen03O05ORF3531P |
| 3534 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen03O05ORF3531P |
| 3535 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4294 | protein YubE | |||
| 4295 | M | M.Sfl712783ORFFP (100% identity) | M.Sen03O05ORF4295P | |
| 4296 | YccB | |||
| 3514 | 97 aa hypothetical protein | |||
| 3515 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen03O05ORF3515P |
| 3516 | 670 aa hypothetical protein | |||
| 1157 | metal dependent phosphohydrolase | |||
| 1158 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen03O05DcmP |
| 1159 | V | very short patch repair protein | V.Sen03O05DcmP | |
| 1160 | carboxylate/amino acid/amine transporter | |||
| 1510 | periplasmic protein | |||
| 1511 | M | DNA methylase | ATGCAT | M.Sen03O05ORF1511P |
| 1512 | DNA-binding protein Fis | |||
| 4757 | protein DamX | |||
| 4758 | M | DNA adenine methylase | GATC | M.Sen03O05DamP |
| 4759 | ribulose-phosphate 3-epimerase | |||
| 763 | 113 aa hypothetical protein | |||
| 764 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen03O05ORF764P |
| 765 | bacteriophage replication gene A | |||
| 766 | 62 aa hypothetical protein | |||
| 767 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen03O05ORF767P |
| ??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen03O05ORF767P |
| 769 | pbsx family phage portal protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2089 | cyanide-insensitive oxidase CioA | |||
| 2090 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen03O05ORF2091P |
| 2091 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen03O05ORF2091P |
| 2092 | major facilitator superfamily MFS_1 | |||