Salmonella enterica subsp. enterica serovar Agona 27.O.98 |
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Putative Salmonella enterica subsp. enterica serovar Agona 27.O.98 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,736,415 bp
GenBank #: CASQ00000000 (NZ_CASQ00000000)
REBASE acronym: Sen27O98
Org_num: 16218
All begin SA27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3296 | protein TIR | |||
| 3297 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen27O98ORF3297P |
| 3298 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen27O98ORF3297P |
| 3299 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen27O98ORF3297P |
| 3300 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen27O98ORF3297P |
| 3301 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3280 | 97 aa hypothetical protein | |||
| 3281 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen27O98ORF3281P |
| 3282 | 670 aa hypothetical protein | |||
| 3911 | metal dependent phosphohydrolase | |||
| 3912 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen27O98DcmP |
| 3913 | V | V.StyUK1DcmP (100% identity) | V.Sen27O98DcmP | |
| 3914 | carboxylate/amino acid/amine transporter | |||
| 1262 | periplasmic protein | |||
| 1263 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen27O98ORF1263P |
| 1264 | DNA-binding protein Fis | |||
| 4676 | protein DamX | |||
| 4677 | M | M.StyTDamP (100% identity) | GATC | M.Sen27O98DamP |
| 4678 | ribulose-phosphate 3-epimerase | |||
| 755 | DksA/TraR family C4-type zinc finger protein | |||
| 756 | M | M.SenSA5ORF21849P (100% identity) | GATC | M.Sen27O98ORF756P |
| 757 | bacteriophage replication gene A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3696 | major facilitator superfamily MFS_1 | |||
| 3697 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen27O98ORF3697P |
| 3698 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen27O98ORF3697P |
| 3699 | cyanide-insensitive oxidase CioA | |||