Escherichia coli O174:H8 04-3038 |
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Putative Escherichia coli O174:H8 04-3038 RM systems
Ref: Trees,E. et al. Genome Announc 2 (4), e00718-14 (2014)
REBASE ref # 18145
Contig set: 5,632,708 bp
GenBank #: JHOC00000000 (NZ_JHOC00000000)
REBASE acronym: Eco3038
Org_num: 16258
All begin BW70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14600 | 165 aa hypothetical protein | |||
| 14605 | R | EcosA33IIIP (100% identity) | Eco3038ORF14615P | |
| 14610 | S | S.Eco7607ORFCP (100% identity) | S.Eco3038ORF14615P | |
| 14615 | M | M2.EcosA33III (100% identity) | M2.Eco3038ORF14615P | |
| 14620 | M | M1.EcosA33III (100% identity) | M1.Eco3038ORF14615P | |
| 14625 | transcriptional regulator | |||
| 24000 | variant SH3 domain protein | |||
| 24010 | S | S.Eco28C19ORF11355P (98% identity) | S.Eco3038ORF24015P | |
| 24015 | M | M.Eco3741ORFDP (99% identity) | M.Eco3038ORF24015P | |
| 24020 | R | Eco3741ORFDP (99% identity) | Eco3038ORF24015P | |
| 24025 | 118 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | DNA adenine methylase | M.Eco3038ORFBP | |
| 23250 | cell envelope protein TolA | |||
| ??? | M | DNA adenine methylase | M.Eco3038ORFAP | |
| 19570 | transcriptional regulator | |||
| 20125 | M | M.Eco4705ORFJP (87% identity) | M.Eco3038ORF20125P | |
| 20130 | 73 aa hypothetical protein | |||
| 19615 | Shiga toxin subunit A | |||
| 19635 | M | 81 aa hypothetical protein | M.Eco3038ORF19635P | |
| 23145 | 162 aa hypothetical protein | |||
| 23150 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco3038ORF23150P |
| 23155 | LexA family transcriptional regulator | |||
| 28340 | 162 aa hypothetical protein | |||
| 28345 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco3038ORF23150P |
| 28350 | LexA family transcriptional regulator | |||
| 23190 | 65 aa hypothetical protein | |||
| 23195 | M | M.Eco3038ORF13540P (99% identity) | M.Eco3038ORF23195P | |
| 23210 | cell envelope protein TolA | |||
| 25480 | endonuclease | |||
| 25485 | M | M.EcoFHI37ORFEP (100% identity) | GATC | M.Eco3038ORF25485P |
| 25490 | 75 aa hypothetical protein | |||
| 14880 | multidrug DMT transporter | |||
| 14885 | V | V.SsoSE61DcmP (100% identity) | V.Eco3038DcmP | |
| 14890 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco3038DcmP |
| 14895 | hydrolase | |||
| 26220 | cruciferin | |||
| 26225 | M | M.EcoFHI37ORFBP (100% identity) | GATC | M.Eco3038ORF26225P |
| 26235 | 71 aa hypothetical protein | |||
| 13535 | 65 aa hypothetical protein | |||
| 13540 | M | M.Eco3038ORF23195P (99% identity) | M.Eco3038ORF13540P | |
| 13555 | cell envelope protein TolA | |||
| 565 | cell division protein DamX | |||
| 570 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3038DamP |
| 575 | ribulose-phosphate 3-epimerase | |||
| 6545 | Fis family transcriptional regulator | |||
| 6550 | M | M.Ecoww7ORF17400P (100% identity) | ATGCAT | M.Eco3038ORF6550P |
| 6555 | 59 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19885 | TrbC | |||
| 19890 | R | EcoC0186ORF25185P (100% identity) | Eco3038ORF19895P | |
| 19895 | M | type III restriction endonuclease subunit M | M.Eco3038ORF19895P | |
| 19905 | NikB | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 28585 | resolvase | |||
| 28590 | R | EcoWP2GmrSDP (96% identity) | Eco3038GmrSD3P | |
| 28595 | damage-inducible protein DinI | |||
| 28570 | resolvase | |||
| 28575 | R | EcoWP2GmrSDP (96% identity) | Eco3038GmrSD2P | |
| 28580 | damage-inducible protein DinI | |||
| 1290 | resolvase | |||
| 1295 | R | EcoWP2GmrSDP (96% identity) | Eco3038GmrSD4P | |
| 1300 | damage-inducible protein DinI | |||
| 28530 | resolvase | |||
| 28535 | R | EcoWP2GmrSDP (96% identity) | Eco3038GmrSDP | |
| 28540 | damage-inducible protein DinI | |||