Vibrio parahaemolyticus 970107 |
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Putative Vibrio parahaemolyticus 970107 RM systems
Ref: Eppinger,M. et al. unpublished
REBASE ref # 20025
Contig set: 5,105,352 bp
GenBank #: AZIQ00000000 (NZ_AZIQ00000000)
REBASE acronym: Vpa107
Org_num: 16275
All begin D029_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4621 | M | M1.Vpa107ORF4620P (100% identity) | M.Vpa107ORF4620P | |
| 4622 | S | S.Vvu117III (31% identity) | S.Vpa107ORF4620P | |
| 4623 | R | Vpa1557ORFCP (98% identity) | Vpa107ORF4620P | |
| 4624 | AAA domain protein | |||
| 4619 | DNA binding, excisionase family domain protein | |||
| 4620 | M | M1.Vpa107ORF4620P (100% identity) | M.Vpa107ORF4620P | |
| 4621 | N-6 DNA Methylase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4503 | polysaccharide deacetylase family protein | |||
| 4504 | R | Kva3261ORFBP (27% identity) | CTCTTC | Vpa107ORF4506P |
| 4505 | alwI restriction endonuclease family protein | |||
| 4506 | M | M.Vpa1708ORFCP (90% identity) | CTCTTC | M.Vpa107ORF4506P |
| 4507 | bacterial regulatory helix-turn-helix, lysR | |||
| 4320 | sporulation related domain protein | |||
| 4321 | M | M.VphVPD14DamP (100% identity) | GATC | M.Vpa107DamP |
| 4322 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3100 | 78 aa hypothetical protein | |||
| 3101 | M | M.EasEn30ORF44210P (97% identity) | M.Vpa107ORF3101P | |
| 3102 | R | Vfl1235ORFFP (99% identity) | Vpa107ORF3101P | |
| 3103 | aBC transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3226 | lipoprotein | |||
| 3227 | R | HNH endonuclease family protein | Vpa107McrBP | |
| 3229 | 44 aa hypothetical protein | |||