Erwinia tracheiphila BuffGH |
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Putative Erwinia tracheiphila BuffGH RM systems
Ref: Shapiro,L.R. et al. Genome Announc 3 (3), e00482-15 (2015)
REBASE ref # 19847
Contig set: 5,015,962 bp
GenBank #: JXNU00000000 (NZ_JXNU00000000)
REBASE acronym: EtrBGH
Org_num: 16310
All begin SY86_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23610 | 68 aa hypothetical protein | |||
| 23615 | M | M.EtrMDORF17810P (100% identity) | GATC | M.EtrBGHORF23615P |
| 23620 | 174 aa hypothetical protein | |||
| 1635 | antitoxin | |||
| 1640 | M | M.EtrGHORF20720P (100% identity) | M.EtrBGHORF1640P | |
| 1645 | 61 aa hypothetical protein | |||
| 1680 | 68 aa hypothetical protein | |||
| 1685 | M | M.EtrMDORF17810P (100% identity) | GATC | M.EtrBGHORF1685P |
| 1690 | 174 aa hypothetical protein | |||
| 24370 | 88 aa hypothetical protein | |||
| 24375 | M | M.EtrGHORF7925P (100% identity) | M.EtrBGHORF24375P | |
| 24380 | 188 aa hypothetical protein | |||
| 25605 | T3SS effector protein NleD | |||
| 25610 | M | M.EtrGHORF9205P (100% identity) | M.EtrBGHORF25610P | |
| 25615 | integrase | |||
| 3315 | 78 aa hypothetical protein | |||
| 3320 | M | M.EtrGHORF15290P (100% identity) | M.EtrBGHORF3320P | |
| 3325 | pseudogene | |||
| 8790 | antitoxin | |||
| 8795 | M | M.EtrGHORF20720P (100% identity) | M.EtrBGHORF8795P | |
| 8800 | 61 aa hypothetical protein | |||
| 8830 | 68 aa hypothetical protein | |||
| 8835 | M | M.EtrMDORF17810P (100% identity) | GATC | M.EtrBGHORF8835P |
| 8840 | 174 aa hypothetical protein | |||
| 9735 | bacteriophage protein | |||
| 9740 | M | M.EtrGHORF12190P (100% identity) | GATC | M.EtrBGHORF9740P |
| 9745 | phage protein | |||
| 9810 | bacteriophage protein | |||
| 9815 | M | M1.EtrGHORF12265P (100% identity) | GATC | M.EtrBGHORF9815P |
| 9820 | pseudogene | |||
| 9815 | methyltransferase | |||
| 9820 | M | M2.EtrGHORF12265P (100% identity) | M.EtrBGHORF9820P | |
| 9825 | phage protein | |||
| 9920 | 218 aa hypothetical protein | |||
| 9925 | M | M.EtrMDORF4655P (100% identity) | CCWGG | M.EtrBGHORF9925P |
| 9930 | V | V.EtrGHORF12375P (100% identity) | V.EtrBGHORF9925P | |
| 9935 | 88 aa hypothetical protein | |||
| 11130 | 68 aa hypothetical protein | |||
| 11135 | M | M.EtrMDORF17810P (100% identity) | GATC | M.EtrBGHORF11135P |
| 11140 | 174 aa hypothetical protein | |||
| 14215 | 113 aa hypothetical protein | |||
| 14220 | M | M.EtrGHORF23825P (100% identity) | GGCGCC | M.EtrBGHORF14220P |
| 14225 | R | EtrGHORF23825P (46% identity) | GGCGCC | EtrBGHORF14220P |
| 14230 | membrane protein | |||
| 14325 | 200 aa hypothetical protein | |||
| 14330 | M | M.EtrGHORF23935P (100% identity) | M.EtrBGHORF14330P | |
| 14335 | chromosome partitioning protein ParB | |||
| 16800 | 476 aa hypothetical protein ETR_14026 | |||
| 16805 | R | EtrSCR3ORF320P (100% identity) | GCTNAGC | EtrBGHORF16810P |
| 16810 | M | M.EtrSCR3ORF320P (100% identity) | GCTNAGC | M.EtrBGHORF16810P |
| 16815 | biofilm formation regulator HmsP | |||
| 19990 | DamX | |||
| 19995 | M | M.EtrGHDamP (100% identity) | GATC | M.EtrBGHDamP |
| 20000 | ribulose-phosphate 3-epimerase | |||
| 20460 | pseudogene | |||
| 20465 | M | M.EtrGHORF4435P (100% identity) | M.EtrBGHORF20465P | |
| 20470 | 78 aa hypothetical protein | |||
| 21590 | 769 aa hypothetical protein | |||
| 21595 | M | M.EtrGHORF5565P (99% identity) | CTCGAG | M.EtrBGHORF21595P |
| 21600 | 67 aa hypothetical protein | |||
| 23020 | 85 aa hypothetical protein | |||
| 23025 | M | M.EtrGHORF7010P (86% identity) | M.EtrBGHORF23025P | |
| 23030 | 65 aa hypothetical protein | |||
| 23150 | 78 aa hypothetical protein | |||
| 23155 | M | M.EtrGHORF7125P (100% identity) | M.EtrBGHORF23155P | |
| 23160 | acetyltransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9870 | pseudogene | |||
| 9875 | R | EtrGHORF12330P (94% identity) | EtrBGHORF9880P | |
| 9880 | M | M.EtrGHORF12330BP (93% identity) | M1.EtrBGHORF9880P | |
| 9885 | transposase | |||
| 9890 | M | M.EtrGHORF12330AP (96% identity) | M2.EtrBGHORF9880P | |
| 9895 | integrase | |||