Escherichia coli B1020-2 |
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Putative Escherichia coli B1020-2 RM systems
Ref: Pattabiraman,V. and Bopp,C.A. Genome Announc 3 (3), e00564-15 (2015)
REBASE ref # 19841
Contig set: 4,774,574 bp
GenBank #: JYIF00000000 (NZ_JYIF00000000)
REBASE acronym: EcoB1020
Org_num: 16321
All begin UH36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 705 | endoribonuclease SymE | |||
| 710 | S | S.EcosS142ORF37770P (100% identity) | S.EcoB1020ORF715P | |
| 715 | M | M.EcosS142ORF37770P (100% identity) | M.EcoB1020ORF715P | |
| ??? | R | Ecoc20ORFEP (99% identity) | EcoB1020ORF715P | |
| ??? | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 95 | 500 aa hypothetical protein | |||
| 100 | M | M.EcoSTEC413ORF4250P (100% identity) | ACCTGC | M.EcoB1020ORF100P |
| 105 | transposase | |||
| 2160 | 214 aa hypothetical protein | |||
| 2165 | R | Mmo12289ORF1444P (100% identity) | GCGCGC | EcoB1020ORF2170P |
| 2170 | M | M.KquU41ORF24735P (100% identity) | GCGCGC | M.EcoB1020ORF2170P |
| 2175 | V | V.EcoM9803ORF8185P (100% identity) | V.EcoB1020ORF2170P | |
| 2180 | conjugal transfer TraD family protein | |||
| 9295 | hydrolase | |||
| 9300 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoB1020DcmP |
| 9305 | V | V.SsoSE61DcmP (100% identity) | V.EcoB1020DcmP | |
| 9310 | multidrug DMT transporter | |||
| 3960 | Fis family transcriptional regulator | |||
| 3965 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoB1020ORF3965P |
| 3970 | 59 aa hypothetical protein | |||
| 7080 | ribulose-phosphate 3-epimerase | |||
| 7085 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoB1020DamP |
| 7090 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 720 | DEAD/DEAH box helicase | |||
| ??? | R | EcoZK126MrrP (100% identity) | EcoB1020MrrP | |
| 730 | GTP-binding protein | |||
| ??? | Mrr restriction system protein | |||
| 725 | R | SenHNK130MrrP (100% identity) | EcoB1020Mrr2P | |
| 730 | GTP-binding protein | |||