Escherichia coli F736-c1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli F736-c1 RM systems
Ref: Pattabiraman,V. and Bopp,C.A. Genome Announc 3 (3), e00564-15 (2015)
REBASE ref # 19841
Contig set: 4,954,470 bp
GenBank #: JYHY00000000 (NZ_JYHY00000000)
REBASE acronym: EcoF736
Org_num: 16315
All begin UH28_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21165 | metal-dependent hydrolase | |||
| 21170 | R | EcosB2CORFFP (99% identity) | EcoF736ORF21185P | |
| 21175 | 227 aa hypothetical protein | |||
| 21180 | S | S.EcosB2CORFFP (100% identity) | S.EcoF736ORF21185P | |
| 21185 | M | M.EcosB2CORFFP (100% identity) | M.EcoF736ORF21185P | |
| 21190 | 388 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7595 | LexA family transcriptional regulator | |||
| 7600 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoF736ORF7600P |
| 7605 | 162 aa hypothetical protein | |||
| 20730 | 60 aa hypothetical protein | |||
| 20735 | M | M1.EcoF6339ORF23580P (100% identity) | ACTGGG | M1.EcoF736ORF20735P |
| 20740 | M | M2.EcoF6699II (100% identity) | ACTGGG | M2.EcoF736ORF20735P |
| 20745 | PLD-like domain protein | |||
| 22970 | 70 aa hypothetical protein | |||
| 22975 | M | M.EcoF6699ORFHP (100% identity) | M.EcoF736ORF22975P | |
| 22990 | tail fiber assembly protein | |||
| 20570 | hydrolase | |||
| 20575 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoF736DcmP |
| 20580 | V | V.SsoSE61DcmP (100% identity) | V.EcoF736DcmP | |
| 20585 | multidrug DMT transporter | |||
| 20255 | 115 aa hypothetical protein | |||
| 20260 | M | M.Kpn80191ORFAP (100% identity) | CTGAAG | M.EcoF736ORF20260P |
| 20265 | conjugal transfer TraD family protein | |||
| 12085 | ribulose-phosphate 3-epimerase | |||
| 12090 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoF736DamP |
| 12095 | cell division protein DamX | |||
| 16775 | Fis family transcriptional regulator | |||
| 16780 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoF736ORF16780P |
| 16785 | 59 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23505 | 100 aa hypothetical protein | |||
| 23510 | R | EcoF6699ORFJP (100% identity) | GAACC | EcoF736ORF23515P |
| ??? | M | M.EcoRS571ORF20935P (100% identity) | GAACC | M.EcoF736ORF23515P |
| 23520 | ATP-dependent helicase | |||