Leptospirillum species Group II 'CF-1' |
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Putative Leptospirillum species Group II 'CF-1' RM systems
Ref: Ferrer,A. et al. unpublished
REBASE ref # 19991
Complete sequence: 2,709,324 bp
GenBank #: CP012147
REBASE acronym: LspCF1
Org_num: 16101
All begin ABH19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2620 | 993 aa hypothetical protein | |||
| 2625 | R | Pae455ORF271P (77% identity) | LspCF1ORF2645P | |
| 2630 | S | S2.KquBL05ORF31400P (35% identity) | S1.LspCF1ORF2645P | |
| 2635 | S | S.EbaMkORF1193P (30% identity) | S2.LspCF1ORF2645P | |
| 2640 | anticodon nuclease | |||
| 2645 | M | M.LfeC23ORF624P (81% identity) | M.LspCF1ORF2645P | |
| 2650 | 987 aa hypothetical protein | |||
| 6470 | 197 aa hypothetical protein | |||
| 6475 | R | UbaMDORFO8P (63% identity) | LspCF1ORF6530BP | |
| 6480 | transposase | |||
| 6485 | R | EsaRM52ORFAP (87% identity) | LspCF1ORF6530AP | |
| 6490 | 172 aa hypothetical protein | |||
| 6495 | 69 aa hypothetical protein | |||
| 6500 | S | S.UbaMDORFO8P (38% identity) | S.LspCF1ORF6530P | |
| 6505 | 66 aa hypothetical protein | |||
| 6510 | transposase | |||
| 6515 | 329 aa hypothetical protein | |||
| 6520 | transcriptional regulator | |||
| 6525 | 121 aa hypothetical protein | |||
| 6530 | M | M.UbaMDORFO8P (83% identity) | M.LspCF1ORF6530P | |
| 6535 | 144 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 85 | Conserved protein of unknown function | |||
| 90 | RM | EsaRM23ORFAP (99% identity) | LspCF1ORF90P | |
| 95 | 473 aa hypothetical protein | |||
| 3725 | 161 aa hypothetical protein | |||
| 3730 | M | M.LfeYSKORF3380P (100% identity) | GGATC | M.LspCF1ORF3730P |
| 3735 | UDP-galactopyranose mutase | |||
| 11735 | 269 aa hypothetical protein | |||
| 11740 | RM | EsaRM24ORFAP (100% identity) | LspCF1ORF11740P | |
| 11745 | pseudogene | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11025 | 63 aa hypothetical protein | |||
| 11030 | M | M.LfeSpCORFEP (100% identity) | M.LspCF1ORF11030P | |
| 11035 | 501 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6430 | 108 aa hypothetical protein | |||
| 6435 | R | EsaRM32MrrP (100% identity) | LspCF1MrrP | |
| 6440 | 136 aa hypothetical protein | |||