Ref: Challacombe,J.F. et al. unpublished

REBASE ref # 10499

Complete sequence: 4,689,441 bp

GenBank #: CP000950 (NC_010465)

REBASE acronym: YpsYP

Org_num: 4995

 

All begin YPK_

Type I
ORF Gene Most similar Specificity Name
 
64 protein of unknown function DUF262
65 M M.EcoE24377ORF286P (0% identity) M.YpsYPORF65P
66 transposase IS3/IS911 family protein
 
3665 type I restriction-modification system, M
3666 R Yps584ORF21290P (0% identity) CRAANNNNNNCTC R1.YpsYPIP
3667 40 aa conserved hypothetical protein
3668 integrase family protein
3669 59 aa hypothetical protein
3670 61 aa hypothetical protein
3671 273 aa conserved hypothetical protein
3672 M M.Yps584ORF21325P (1% identity) CRAANNNNNNCTC M.YpsYPI
3673 S S.Yps584ORF21325P (1% identity) CRAANNNNNNCTC S.YpsYPI
3674 R Yps584ORF21325P (1% identity) CRAANNNNNNCTC R2.YpsYPIP
3676 integrase family protein
Type II
ORF Gene Most similar Specificity Name
 
180 NUDIX hydrolase
181 M M.Yps584ORF3305P (1% identity) M.YpsYPORF181P
182 145 aa hypothetical protein
 
227 Sporulation domain protein
228 M M.Ysi228DamP (1% identity) GATC M.YpsYPDamP
229 Ribulose-phosphate 3-epimerase
 
2319 Exonuclease RNase T and DNA polymerase III
2320 M M.Yps584ORF14330P (1% identity) GATC M1.YpsYPORF2320P
2321 M M.Yps584ORF14335P (1% identity) M2.YpsYPORF2320P
2322 replication gene A
Type IV
ORF Gene Most similar Specificity Name
 
3670 61 aa hypothetical protein
3671 R Yps2666McrCP (1% identity) YpsYPMcrCP
3672 type I restriction-modification system, M
Orphan M
ORF Gene Most similar Specificity Name
 
887 gpB bacteriophage P2-like protein
888 M M.Yps584ORF6985P (1% identity) GATC M.YpsYPORF888P
889 75 aa conserved hypothetical protein