Synechococcus species PCC 7002 |
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Putative Synechococcus species PCC 7002 RM systems
Ref: Li,T. et al. unpublished
REBASE ref # 10493
| Sequence length: | GenBank #: | |
| Chromosome: | 3,008,047 bp | CP000951 (NC_010475) |
| plasmid pAQ3: | 16,103 bp | CP000953 (NC_010477) |
| plasmid pAQ5: | 38,515 bp | CP000955 (NC_010479) |
| plasmid pAQ6: | 124,030 bp | CP000956 (NC_010480) |
REBASE acronym: Aqu
Org_num: 111
All begin SYNPCC7002_A, SYNPCC7002_C, SYNPCC7002_E, SYNPCC7002_F
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pAQ3 | ||||
| 2 | 110 aa hypothetical protein | |||
| 3 | M | M.Ssp8807ORF14755P (95% identity) | CRAANNNNNNNNTGAC | M.AquV |
| 4 | S | S.GbeBORF3570P (35% identity) | CRAANNNNNNNNTGAC | S.AquV |
| 5 | 474 aa conserved hypothetical protein, MloB like | |||
| 6 | R | Ssp8807ORF14755P (97% identity) | CRAANNNNNNNNTGAC | AquVP |
| 7 | 304 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 357 | 395 aa conserved hypothetical protein | |||
| 358 | RM | Ssp8807ORF1900P (100% identity) | GCCGNAC | AquII |
| 359 | 173 aa conserved hypothetical protein | |||
| 848 | PleD protein | |||
| 849 | M | M.Ssp8807ORF4355P (99% identity) | CGATCG | M.AquORF849P |
| 850 | UDP-N-acetylmuramoylalanine--D-glutamate ligase | |||
| 1187 | 201 aa hypothetical protein | |||
| 1188 | M | M.Ssp42902ORFCAP (98% identity) | CYCGRG | M.AquIA |
| ??? | M | M.Ssp7117ORF6065P (35% identity) | CYCGRG | M.AquIB |
| 1189 | R | Ssp11901ORF10055P (99% identity) | CYCGRG | AquI |
| 1190 | peptidase, U32 family | |||
| 1619 | 393 aa conserved hypothetical protein | |||
| 1620 | M | M.Ssp130192ORFAP (99% identity) | GATC | M.AquDam |
| 1621 | cyanoglobin | |||
| 2131 | homoserine dehydrogenase | |||
| 2132 | RM | Ssp42902ORFDP (83% identity) | GAGGAG | AquIII |
| 2133 | 127 aa conserved hypothetical protein | |||
| 2313 | 81 aa conserved hypothetical protein | |||
| 2314 | RM | Ssp130192ORFBP (98% identity) | GRGGAAG | AquIV |
| 2315 | 67 aa conserved hypothetical protein | |||
| plasmid pAQ5 | ||||
| 11 | 347 aa hypothetical protein | |||
| 12 | M | M.Ssp11901ORF615P (90% identity) | YGGCCR | M.AquORF12P |
| 13 | 86 aa hypothetical protein | |||
| plasmid pAQ6 | ||||
| 21 | 166 aa conserved hypothetical protein (DUF559) | |||
| 22 | M | M.Ncf36SspHP (54% identity) | M.AquORF22P | |
| 23 | 104 aa conserved hypothetical protein | |||
| 88 | 81 aa conserved hypothetical protein | |||
| 89 | RM | Ssp42902ORFMP (79% identity) | AquORF89P | |
| 90 | 261 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pAQ5 | ||||
| 34 | 276 aa conserved hypothetical protein, unknown function | |||
| 35 | R | Csp4102ORF41500P (73% identity) | AquORF38P | |
| 36 | 84 aa conserved hypothetical protein | |||
| 37 | 165 aa conserved hypothetical protein | |||
| 38 | M | M.Csp4102ORF41500P (64% identity) | M.AquORF38P | |
| 39 | 624 aa Conserved hypothetical protein, with | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1000 | magnesium-chelatase, subunit H | |||
| 1001 | R | Ssp8807MrrP (99% identity) | AquMrrP | |
| 1002 | 3-oxoacyl-[acyl-carrier-protein] synthase | |||
| 1071 | delta-1-pyrroline-5-carboxylate dehydrogenase | |||
| ??? | R | GTPase subunit of Type II restriction endonuclease | AquMcrBP | |
| 1073 | 658 aa conserved hypothetical protein | |||