Salmonella enterica subsp. enterica serovar Enteritidis SEE1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Enteritidis SEE1 RM systems
Ref: Moreau,M.R. et al. unpublished
REBASE ref # 20468
Complete sequence: 4,678,365 bp
GenBank #: CP011790
REBASE acronym: SenSEE1
Org_num: 16024
All begin SEE1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22175 | transporter | |||
| 22180 | R | SenSEE2ORF22195P (100% identity) | GGYANNNNNNTCG | SenSEE1ORF22190P |
| 22185 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.SenSEE1ORF22190P |
| 22190 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.SenSEE1ORF22190P |
| 22195 | 90 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5250 | hydrolase | |||
| 5255 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.SenSEE1DcmP |
| 5260 | V | V.StyUK1DcmP (100% identity) | V.SenSEE1DcmP | |
| 5265 | multidrug DMT transporter | |||
| 13450 | pseudogene | |||
| 13455 | M | M.SspA39ORFGP (100% identity) | GATC | M.SenSEE1ORF13455P |
| 13460 | 75 aa hypothetical protein | |||
| 16650 | Fis family transcriptional regulator | |||
| 16655 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSEE1ORF16655P |
| 16660 | membrane protein | |||
| 17135 | ribulose-phosphate 3-epimerase | |||
| 17140 | M | M.StyTDamP (100% identity) | GATC | M.SenSEE1DamP |
| 17145 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1730 | sugar transporter | |||
| 1735 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.SenSEE1ORF1735P |
| ??? | R | SenSL913ORF3124P (100% identity) | CAGAG | SenSEE1ORF1735P |
| 1750 | cytochrome D ubiquinol oxidase subunit I | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22190 | DNA methyltransferase | |||
| ??? | R | Ssp3CMrrP (100% identity) | SenSEE1MrrP | |
| ??? | Type I restriction-modification system methyltransferase | |||