Escherichia coli DH1Ec104 |
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Putative Escherichia coli DH1Ec104 RM systems
Ref: Cheng,J.-F. unpublished
REBASE ref # 19988
Complete sequence: 4,612,363 bp
GenBank #: CP012126
REBASE acronym: EcoEc104
Org_num: 16097
All begin ADZ27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22430 | endoribonuclease SymE | |||
| 22435 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoEc104ORF22440P |
| 22440 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoEc104ORF22440P |
| 22445 | R | Esp17TGCORF18925P (100% identity) | AACNNNNNNGTGC | EcoEc104ORF22440P |
| 22450 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10095 | multidrug DMT transporter | |||
| 10100 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoEc104DcmP |
| 10105 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoEc104DcmP |
| 10110 | hydrolase | |||
| 16730 | Fis family transcriptional regulator | |||
| 16735 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoEc104ORF16735P |
| 16740 | 59 aa hypothetical protein | |||
| 17365 | ribulose-phosphate 3-epimerase | |||
| 17370 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoEc104DamP |
| 17375 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5845 | DNA-invertase | |||
| 5850 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoEc104ORF5850P |
| 5855 | anti-adapter protein IraM | |||
| 22415 | 906 aa hypothetical protein | |||
| 22420 | R | Msa17McrC2P (100% identity) | EcoEc104McrCP | |
| 22425 | R | SenHNK130McrBP (100% identity) | EcoEc104McrBP | |
| 22430 | endoribonuclease SymE | |||
| 22445 | pseudogene | |||
| 22450 | R | SenHNK130MrrP (100% identity) | EcoEc104MrrP | |
| 22455 | GTP-binding protein | |||