Xanthomonas oryzae pv. oryzicola CFBP2286 |
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Putative Xanthomonas oryzae pv. oryzicola CFBP2286 RM systems
Ref: Wilkins,K.E. et al. Front Plant Sci (2015) In press
REBASE ref # 19956
| Sequence length: | GenBank #: | |
| Chromosome: | 4,969,419 bp | CP011962 |
| plasmid unnamed: | 36,574 bp | CP011963 |
REBASE acronym: Xor2286
Org_num: 16052
All begin ACU11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5555 | 599 aa hypothetical protein | |||
| 5560 | S | S.Xor09ORF16545P (65% identity) | GAGNNNNNNCTTC | S.Xor2286III |
| ??? | M | M.Xax6789ORF2505P (94% identity) | GAGNNNNNNCTTC | M.Xor2286III |
| ??? | R | XorHGA4ORFCP (99% identity) | GAGNNNNNNCTTC | Xor2286IIIP |
| 5580 | 87 aa hypothetical protein | |||
| 5585 | plasmid stabilization protein | |||
| 5590 | R | XorGD06ORF15590P (100% identity) | GAGNNNNNNCCT | Xor2286IP |
| 5595 | 211 aa hypothetical protein | |||
| 5600 | 240 aa hypothetical protein | |||
| 5605 | M | M.XorL8I (100% identity) | GAGNNNNNNCCT | M.Xor2286I |
| 5610 | S | S.XorGD06ORF15590P (72% identity) | GAGNNNNNNCCT | S.Xor2286I |
| 5615 | 88 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13140 | 78 aa conserved hypothetical protein | |||
| 13145 | M | M.XorOS198ORF22245P (100% identity) | M.Xor2286ORF13145P | |
| 13150 | 73 aa hypothetical protein | |||
| 15560 | 73 aa hypothetical protein | |||
| 15565 | M | M.XorYN24ORF155P (100% identity) | M.Xor2286ORF15565P | |
| 15570 | 82 aa hypothetical protein | |||
| plasmid unnamed | ||||
| 21860 | 85 aa hypothetical protein | |||
| 21865 | M | M.XorO79ORF23700P (99% identity) | TGGCCA | M.Xor2286ORF21865P |
| 21870 | 99 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10400 | transposase | |||
| 10405 | M | M.XorNJ01ORF16665P (100% identity) | GGAGG | M.Xor2286II |
| 10410 | 223 aa hypothetical protein | |||
| 10415 | R | XorGD06ORF10620P (100% identity) | GGAGG | Xor2286IIP |
| 10420 | transposase | |||