Francisella tularensis subsp. holarctica JAP |
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Putative Francisella tularensis subsp. holarctica JAP RM systems
Ref: Johnson,S.L. et al. Genome Announc 3 (2) (2015)
REBASE ref # 19726
Contig set: 1,907,159 bp
GenBank #: JUJU00000000 (NZ_JUJU00000000)
REBASE acronym: FtuJAP
Org_num: 15862
All begin CH66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 351 | 516 aa hypothetical protein | |||
| ??? | R | FtuNVF1ORF9620P (99% identity) | FtuJAPORF361P | |
| 356 | 256 aa hypothetical protein | |||
| 357 | 69 aa hypothetical protein | |||
| 358 | type I restriction modification DNA specificity | |||
| 359 | S | S1.FtuNVF1ORF9620P (100% identity) | S.FtuJAPORF361P | |
| 360 | Cold-shock DNA-binding domain protein | |||
| ??? | M | M.Ftu595ORFBP (97% identity) | M.FtuJAPORF361P | |
| 365 | sel1 repeat family protein | |||
| 564 | dihydrouridine synthase family protein | |||
| 565 | M | M.FtuH0001ORF3525P (100% identity) | M.FtuJAPORF565P | |
| 566 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2098 | aldose 1-epimerase family protein | |||
| 2099 | R | FtuNVF1ORF18740P (68% identity) | GGCC | FtuJAPORF2101P |
| 2100 | ngoPII restriction endonuclease family protein | |||
| ??? | M | M.FtuuS4ORF50P (99% identity) | GGCC | M.FtuJAPORF2101P |
| 2102 | C-5 cytosine-specific DNA methylase family | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1758 | uracil-DNA glycosylase | |||
| 1759 | R | FtuT01ORF8795P (100% identity) | FtuJAPORF1759P | |
| 1760 | 176 aa hypothetical protein | |||
| 720 | 92 aa hypothetical protein | |||
| ??? | R | FtuH0001ORF2790P (95% identity) | FtuJAPORF721P | |
| 725 | 113 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1137 | universal stress family protein | |||
| 1138 | R | FtuT01ORF4925P (100% identity) | FtuJAPORF1138P | |
| 1139 | regulator of chromosome condensation (RCC1) | |||