Acidithrix ferrooxidans Py-F3 |
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Putative Acidithrix ferrooxidans Py-F3 RM systems
Ref: Eisen,S. et al. Genome Announc 3 (2) (2015)
REBASE ref # 19715
GenBank #: JXYS00000000
REBASE acronym: AfePyF3
Org_num: 15877
All begin AXFE_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24830 | 296 aa hypothetical protein | |||
| 24840 | R | RspACS1ORF39145P (80% identity) | AfePyF3ORF24870P | |
| 24850 | 241 aa hypothetical protein | |||
| 24860 | S | S.AigBAE2ORF7750P (38% identity) | S.AfePyF3ORF24870P | |
| 24870 | M | M.RspACS1ORF39145P (84% identity) | M.AfePyF3ORF24870P | |
| 24880 | 327 aa hypothetical protein | |||
| 9200 | chromosome segregation protein | |||
| 9210 | R | RspACS1ORF39145P (77% identity) | AfePyF3ORF9230P | |
| 9220 | S | S.Kba59966ORF7745P (35% identity) | S.AfePyF3ORF9230P | |
| 9230 | M | M.RspACS1ORF39145P (80% identity) | M.AfePyF3ORF9230P | |
| 9240 | 264 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21620 | integrase core domain protein | |||
| 21630 | RM | AlaJS42ORFGP (26% identity) | AfePyF3ORF21630P | |
| 21640 | RNA polymerase-associated protein RapA | |||
| 9120 | 91 aa hypothetical protein | |||
| 9130 | M | M.Men109090ORF41510P (51% identity) | M.AfePyF3ORF9130P | |
| 9140 | R | DdiPA24ORF3960P (13% identity) | AfePyF3ORF9130P | |
| 9150 | 101 aa hypothetical protein | |||
| 24920 | 62 aa hypothetical protein | |||
| 24930 | M | M.Ssp6CORF30850P (63% identity) | GATC | M.AfePyF3ORF24930P |
| 24940 | 78 aa hypothetical protein | |||
| 8850 | 139 aa hypothetical protein | |||
| 8860 | M | M.AbaRAAP3ORFAP (99% identity) | M.AfePyF3ORF8860P | |
| 8870 | 63 aa hypothetical protein | |||
| 21760 | 267 aa hypothetical protein | |||
| 21770 | M | M.Taq39ORF6970P (52% identity) | CCCGGG | M.AfePyF3ORF21770P |
| 21780 | 46 aa hypothetical protein | |||
| 9260 | 92 aa hypothetical protein | |||
| 9270 | M | M.Mne43536ORF18945P (64% identity) | GATC | M.AfePyF3ORF9270P |
| 9280 | 61 aa hypothetical protein | |||
| 15180 | RNA polymerase-associated protein RapA | |||
| 15190 | RM | Dpe82ORF1236P (47% identity) | AfePyF3ORF15190P | |
| 15200 | 715 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30050 | 202 aa hypothetical protein | |||
| 30060 | R | GurSL11McrBP (31% identity) | AfePyF3McrBP | |
| 30070 | R | MspC1S70McrC2P (80% identity) | AfePyF3McrCP | |
| 30080 | ADP-ribosyl-[dinitrogen reductase] | |||