Escherichia coli St. Olav178 |
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Putative Escherichia coli St. Olav178 RM systems
Ref: Gabrielsen,C. et al. Genome Announc 3 (3) (2015)
REBASE ref # 19672
Contig set: 5,309,084 bp
GenBank #: JZEC00000000 (NZ_JZEC00000000)
REBASE acronym: EcoSO178
Org_num: 15936
All begin UN94_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23945 | TrmB family transcriptional regulator | |||
| 23950 | M | M.EcoZ1836ORF11435P (62% identity) | M.EcoSO178ORF23950P | |
| 23965 | M | DNA methylase | GATC | M.EcoSO178ORF23965P |
| 23970 | protein ninE | |||
| 2680 | DNA methylase | |||
| 2685 | S | S.EcoSO40ORF8270P (100% identity) | S.EcoSO178ORF2690P | |
| 2690 | RM | EcoSO40ORF8270P (100% identity) | EcoSO178ORF2690P | |
| 2695 | protein hokC | |||
| 22775 | anti-adapter protein IraM | |||
| 22780 | M | DNA adenine methylase | M.EcoSO178ORF22780P | |
| 24100 | ninB protein | |||
| 24105 | M | DNA methylase | GATC | M.EcoSO178ORF24105P |
| 4205 | P21 prophage-derived protein NinB | |||
| 4210 | M | DNA methylase | GATC | M.EcoSO178ORF4210P |
| 8570 | Shiga toxin subunit A | |||
| 8590 | M | DNA adenine methylase | M.EcoSO178ORF8590P | |
| 245 | protein ninE | |||
| 250 | M | DNA methylase | GATC | M.EcoSO178ORF250P |
| 5500 | regulatory protein | |||
| 5505 | M | M.EcoSO176ORF1530P (100% identity) | M.EcoSO178ORF5505P | |
| 5510 | phage protein | |||
| 6270 | hydrolase | |||
| 6275 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoSO178DcmP |
| 6280 | V | V.SflFF64DcmP (100% identity) | V.EcoSO178DcmP | |
| 6285 | multidrug DMT transporter | |||
| 15745 | 59 aa hypothetical protein | |||
| 15750 | M | M.EcoSO176ORF2835P (100% identity) | ATGCAT | M.EcoSO178ORF15750P |
| 15755 | Fis family transcriptional regulator | |||
| 8330 | 101 aa hypothetical protein | |||
| 8335 | M | M.EcoSO176ORF19565P (100% identity) | M.EcoSO178ORF8335P | |
| 8340 | 73 aa hypothetical protein | |||
| 8980 | ribulose-phosphate 3-epimerase | |||
| 8985 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSO178DamP |
| 8990 | cell division protein DamX | |||
| 2365 | Mu prophage protein Com | |||
| 2370 | M | M.EcoSO176ORF11830P (100% identity) | M.EcoSO178ORF2370P | |
| 2375 | flagella biosynthesis regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20175 | pseudogene | |||
| ??? | R | Ecow264ORF380P (100% identity) | GTCTC | EcoSO178ORF20185P |
| 20185 | M | M.EcoSO176ORF21490P (100% identity) | GTCTC | M.EcoSO178ORF20185P |
| 20190 | 596 aa hypothetical protein BX68_13040 | |||