Escherichia coli St. Olav172 |
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Putative Escherichia coli St. Olav172 RM systems
Ref: Gabrielsen,C. et al. Genome Announc 3 (3) (2015)
REBASE ref # 19672
Contig set: 5,560,725 bp
GenBank #: JZDY00000000 (NZ_JZDY00000000)
REBASE acronym: EcoSO172
Org_num: 15932
All begin UN90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6105 | R | EcoSO173ORF28895P (100% identity) | EcoSO172ORF6105P | |
| 2015 | 227 aa hypothetical protein | |||
| 2020 | S | S.EcoSO173ORF28895P (100% identity) | S.EcoSO172ORF2025P | |
| 2025 | M | M.EcoSO173ORF28895P (86% identity) | M.EcoSO172ORF2025P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3235 | 5-nucleotidase | |||
| 3250 | M | M.Eco615ORF12470P (100% identity) | M.EcoSO172ORF3250P | |
| 3255 | TrmB family transcriptional regulator | |||
| 25765 | TrmB family transcriptional regulator | |||
| 25770 | M | M.EcoZ1836ORF11435P (84% identity) | M.EcoSO172ORF25770P | |
| ??? | M | M.EcoYB141ORF15470P (26% identity) | M.EcoSO172ORF25550P | |
| 25560 | 5-nucleotidase | |||
| 26080 | Shiga toxin subunit A | |||
| 26100 | M | M.EcoSO63ORF25000P (25% identity) | M.EcoSO172ORF26100P | |
| 8820 | 72 aa hypothetical protein | |||
| 8825 | M | M.EcopO26ORF185P (100% identity) | M.EcoSO172ORF8825P | |
| 8830 | 103 aa hypothetical protein | |||
| 7280 | 59 aa hypothetical protein | |||
| 7285 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.EcoSO172ORF7285P |
| 7290 | Fis family transcriptional regulator | |||
| 23790 | LexA family transcriptional regulator | |||
| 23795 | M | M.EcoSTEC411ORF14855P (100% identity) | GATC | M.EcoSO172ORF23795P |
| 23800 | 162 aa hypothetical protein | |||
| 24405 | protein ninE | |||
| 24410 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.EcoSO172ORF24410P |
| 24415 | P21 prophage-derived protein NinB | |||
| 25615 | 73 aa hypothetical protein | |||
| 25620 | M | M.Eco9028ORF2481P (100% identity) | SAY | M.EcoSO172ORF25620P |
| 25625 | 103 aa hypothetical protein | |||
| 23855 | 173 aa hypothetical protein | |||
| ??? | M | M.EcoSO179ORF27060P (100% identity) | M.EcoSO172ORF23860P | |
| 23865 | ATPase | |||
| 20335 | 162 aa hypothetical protein | |||
| 20340 | M | M.SflFF80ORF18305P (99% identity) | GATC | M.EcoSO172ORF20340P |
| 20345 | LexA family transcriptional regulator | |||
| 20550 | 257 aa hypothetical protein | |||
| 20555 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.EcoSO172ORF20555P |
| 20560 | R | Sso8033ORF3755P (99% identity) | CCWGG | EcoSO172ORF20555P |
| 20565 | 50 aa hypothetical protein | |||
| 13005 | 77 aa hypothetical protein | |||
| 13010 | M | M.SflFF35ORF20P (100% identity) | GGCC | M.EcoSO172ORF13010P |
| 13015 | 330 aa hypothetical protein | |||
| 6675 | multidrug DMT transporter | |||
| 6680 | V | V.SsoSE61DcmP (100% identity) | V.EcoSO172DcmP | |
| 6685 | M | M.EcoXJ63DcmP (99% identity) | CCWGG | M.EcoSO172DcmP |
| 6690 | hydrolase | |||
| 1005 | helicase | |||
| ??? | RM | Eco3515ORFAP (100% identity) | EcoSO172ORF1005P | |
| 15475 | cell division protein DamX | |||
| 15480 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSO172DamP |
| 15485 | ribulose-phosphate 3-epimerase | |||