Escherichia coli St. Olav40 |
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Putative Escherichia coli St. Olav40 RM systems
Ref: Gabrielsen,C. et al. Genome Announc 3 (3) (2015)
REBASE ref # 19672
Contig set: 5,498,172 bp
GenBank #: JZDV00000000 (NZ_JZDV00000000)
REBASE acronym: EcoSO40
Org_num: 15929
All begin UN87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10860 | 550 aa hypothetical protein | |||
| 10865 | R | SspS13ORF3945P (100% identity) | EcoSO40ORF10870P | |
| 10870 | M | M.SspS13ORF3945P (100% identity) | M.EcoSO40ORF10870P | |
| 10875 | S | S.SspS13ORF3945P (100% identity) | S.EcoSO40ORF10870P | |
| 10880 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1040 | M | M.SflN97ORF8425P (100% identity) | GATC | M.EcoSO40ORF1040P |
| 1045 | ninB protein | |||
| 8260 | DNA methylase | |||
| 8265 | S | S.EcoSO39ORF920P (100% identity) | S.EcoSO40ORF8270P | |
| 8270 | RM | EcoSO39ORF920P (100% identity) | EcoSO40ORF8270P | |
| 8275 | protein hokC | |||
| 19195 | 59 aa hypothetical protein | |||
| 19200 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoSO40ORF19200P |
| 19205 | Fis family transcriptional regulator | |||
| 26745 | 73 aa hypothetical protein | |||
| 26750 | M | M.EcoSTEC636ORF25980P (100% identity) | SAY | M.EcoSO40ORF26750P |
| 26755 | pseudogene | |||
| 12050 | 70 aa hypothetical protein | |||
| 12055 | M | M.Esp10290ORF1290P (100% identity) | GATC | M.EcoSO40ORF12055P |
| 12060 | regulator | |||
| 28970 | 101 aa hypothetical protein | |||
| 28975 | M | M.Sen527ORF25750P (100% identity) | M.EcoSO40ORF28975P | |
| 28980 | 73 aa hypothetical protein | |||
| 12150 | regulatory protein | |||
| 12155 | R | Sso1099IP (100% identity) | CTGCAG | EcoSO40ORF12160P |
| 12160 | M | M.Sso1099I (100% identity) | CTGCAG | M.EcoSO40ORF12160P |
| 12165 | repressor | |||
| 12735 | ribulose-phosphate 3-epimerase | |||
| 12740 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSO40DamP |
| 12745 | cell division protein DamX | |||
| 27170 | 162 aa hypothetical protein | |||
| 27175 | M | M.EcoSO39ORF1400P (100% identity) | GATC | M.EcoSO40ORF27175P |
| 27180 | LexA family transcriptional regulator | |||
| 26590 | 64 aa hypothetical protein | |||
| ??? | M | M.Eph2011ORFAP (100% identity) | GATC | M.EcoSO40ORF26595P |
| 26600 | transcriptional regulator | |||
| 23895 | replication protein | |||
| 23900 | M | M.EcoSO39ORF7070P (100% identity) | GATC | M.EcoSO40ORF23900P |
| 23905 | 129 aa hypothetical protein | |||
| 25940 | multidrug DMT transporter | |||
| 25945 | V | V.SsoSE61DcmP (100% identity) | V.EcoSO40DcmP | |
| 25950 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.EcoSO40DcmP |
| 25955 | hydrolase | |||