Escherichia coli St. Olav39 |
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Putative Escherichia coli St. Olav39 RM systems
Ref: Gabrielsen,C. et al. Genome Announc 3 (3) (2015)
REBASE ref # 19672
Contig set: 5,566,472 bp
GenBank #: JZDU00000000 (NZ_JZDU00000000)
REBASE acronym: EcoSO39
Org_num: 15928
All begin UN86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17475 | 550 aa hypothetical protein | |||
| 17480 | R | SspS13ORF3945P (100% identity) | EcoSO39ORF17485P | |
| 17485 | M | M.SspS13ORF3945P (100% identity) | M.EcoSO39ORF17485P | |
| 17490 | S | S.SspS13ORF3945P (100% identity) | S.EcoSO39ORF17485P | |
| 17495 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10770 | M | M.SflN97ORF8425P (100% identity) | GATC | M.EcoSO39ORF10770P |
| 10775 | ninB protein | |||
| 910 | DNA methylase | |||
| 915 | S | S.EcoSO40ORF8270P (100% identity) | S.EcoSO39ORF920P | |
| 920 | RM | EcoSO40ORF8270P (100% identity) | EcoSO39ORF920P | |
| 925 | protein hokC | |||
| 19495 | 97 aa hypothetical protein | |||
| 19500 | M | M.Xca80ORFEP (100% identity) | M.EcoSO39ORF19500P | |
| 19505 | 73 aa hypothetical protein | |||
| 20105 | 73 aa hypothetical protein | |||
| 20110 | M | M.Sen527ORF25750P (100% identity) | M.EcoSO39ORF20110P | |
| 20115 | pseudogene | |||
| 15040 | 59 aa hypothetical protein | |||
| 15045 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoSO39ORF15045P |
| 15050 | Fis family transcriptional regulator | |||
| 14610 | 73 aa hypothetical protein | |||
| 14615 | M | M.EcoSTEC636ORF25980P (100% identity) | SAY | M.EcoSO39ORF14615P |
| 14620 | pseudogene | |||
| 28090 | 70 aa hypothetical protein | |||
| 28095 | M | M.Esp10290ORF1290P (100% identity) | GATC | M.EcoSO39ORF28095P |
| 28100 | regulator | |||
| 1395 | LexA family transcriptional regulator | |||
| 1400 | M | M.EcoSO40ORF27175P (100% identity) | GATC | M.EcoSO39ORF1400P |
| 1405 | 162 aa hypothetical protein | |||
| 28190 | regulatory protein | |||
| 28195 | R | Sso1099IP (100% identity) | CTGCAG | EcoSO39ORF28200P |
| 28200 | M | M.Sso1099I (100% identity) | CTGCAG | M.EcoSO39ORF28200P |
| 28205 | repressor | |||
| 22675 | ribulose-phosphate 3-epimerase | |||
| 22680 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSO39DamP |
| 22685 | cell division protein DamX | |||
| 5280 | 64 aa hypothetical protein | |||
| ??? | M | M.Eph2011ORFAP (100% identity) | GATC | M.EcoSO39ORF5285P |
| 5290 | transcriptional regulator | |||
| 7065 | replication protein | |||
| 7070 | M | M.EcoSO40ORF23900P (100% identity) | GATC | M.EcoSO39ORF7070P |
| 7075 | 129 aa hypothetical protein | |||
| 12015 | multidrug DMT transporter | |||
| 12020 | V | V.SsoSE61DcmP (100% identity) | V.EcoSO39DcmP | |
| 12025 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.EcoSO39DcmP |
| 12030 | hydrolase | |||