Vibrio splendidus 12B01 |
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Putative Vibrio splendidus 12B01 RM systems
Ref: Polz,M. et al. unpublished
REBASE ref # 10478
Contig set: 5,596,386 bp
GenBank #: NZ_AAMR01000000 (AAMR00000000)
REBASE acronym: Vsp12B
Org_num: 4983
All begin V12B01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 26309 | 842 aa hypothetical protein | |||
| 26314 | R | Vsp68ORF13415P (96% identity) | Vsp12BORF26314P | |
| 26319 | S | S.VfiAORF535P (34% identity) | S.Vsp12BORF26314P | |
| 26324 | M | M2.VfiAORF535P (95% identity) | M2.Vsp12BORF26314P | |
| 26329 | 586 aa hypothetical protein | |||
| 26334 | M | M1.Vsp68ORF13415P (98% identity) | M1.Vsp12BORF26314P | |
| 26339 | 49 aa hypothetical protein | |||
| 2960 | 146 aa hypothetical protein | |||
| 2965 | M | M.VcyED008ORF6305P (92% identity) | M.Vsp12BORF2965P | |
| 2970 | S | S.PteM1021ORF23493P (47% identity) | S.Vsp12BORF2965P | |
| 2975 | Anticodon nuclease PrrC | |||
| 2980 | R | VcyED008ORF6305P (98% identity) | Vsp12BORF2965P | |
| 2985 | site-specific recombinase, phage integrase | |||
| 4853 | 408 aa hypothetical protein | |||
| 4858 | M | M.VleF7V (97% identity) | M.Vsp12BORF4833P | |
| 4863 | S | S.VroAM7ORF33240P (61% identity) | S.Vsp12BORF4833P | |
| 4868 | 291 aa hypothetical protein | |||
| 4873 | 446 aa hypothetical protein | |||
| 4878 | R | VspJ383ORF6785P (96% identity) | Vsp12BORF4833P | |
| 4883 | predicted metal-dependent hydrolase | |||
| 8145 | 230 aa hypothetical protein | |||
| 8150 | R | VspSa110ORFBP (97% identity) | Vsp12BORF8150P | |
| 8155 | M | M.VspSa110ORFBP (96% identity) | M.Vsp12BORF8150P | |
| 8160 | S | S.MspFW1ORFCP (53% identity) | S.Vsp12BORF8150P | |
| 8165 | GTPase subunit of restriction endonuclease-like | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9791 | 675 aa hypothetical protein | |||
| 9796 | RM | Vsp139ORFBP (99% identity) | Vsp12BORF9796P | |
| 9801 | DNA polymerase IV | |||
| 170 | ribulose-phosphate 3-epimerase | |||
| 175 | M | M.VspSED7DamP (100% identity) | GATC | M.Vsp12BDamP |
| 180 | Uncharacterized protein conserved in bacteria | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9776 | 292 aa hypothetical protein | |||
| 9781 | R | Vsp139Mrr2P (99% identity) | Vsp12BMrrP | |
| 9786 | 417 aa hypothetical protein | |||
| 8160 | type I restriction enzyme specificity protein | |||
| 8165 | R | Var7226McrBP (93% identity) | Vsp12BMcrBP | |
| 8170 | R | Var7226McrCP (97% identity) | Vsp12BMcrCP | |
| 8175 | Uncharacterized phage-associated protein | |||