Ref: Vallenet,D. et al. PLoS ONE 3 (3), E1805 (2008)

REBASE ref # 10486

Sequence length:GenBank #:
Chromosome: 3,421,954 bp CU468230 (NC_010400)
plasmid p2ABSDF: 25,014 bp CU468232 (NC_010396)
plasmid p3ABSDF: 24,922 bp CU468233 (NC_010398)

REBASE acronym: AbaS

Org_num: 4989

 

All begin ABSDF, ABSDF_p

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
3411 transposase
3412 R Aca7364ORF1655P (0% identity) AbaSORF3415P
3413 345 aa conserved hypothetical protein
3414 S S.Ain564ORF14240P (0% identity) S.AbaSORF3415P
3415 M M.Api882I (0% identity) M.AbaSORF3415P
3416 221 aa hypothetical protein
 
3558 insertion sequence ATP-binding protein
??? S S.Aha261ORF3150P (0% identity) S.AbaSORF3561P
3561 M M.Asp2ORFCP (0% identity) M.AbaSORF3561P
3562 transposon Tn7-like transposition
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
1324 133 aa hypothetical protein
1325 M M.AbamffORF7455P (0% identity) M.AbaSORF1325P
1326 164 aa hypothetical protein; putative phage related
 
2773 150 aa hypothetical protein; putative exported protein
2774 M M.Aba967ORF1702P (0% identity) M.AbaSORF2774P
2775 fragment of putative phage-related DNA adenine
 
3312 riboflavin synthase alpha chain
3313 M M.Api61ORF17835P (1% identity) RAATTY M.AbaSORF3313P
3314 bifunctional protein [Includes:
 
3355 fragment of transposase of ISAba6, IS982 family
3356 R AbaMSP416ORF13183P (0% identity) C AbaSI
3357 fragment of transposase of ISAba7, IS5 family
 
plasmid p2ABSDF
 
20014 fragment of DNA replication protein
20015 R Aca1570ORFGP (0% identity) CCGG AbaSORF16P
20016 M M.Aca1570ORFGP (0% identity) CCGG M.AbaSORF16P
20017 fragment of mobilization protein
 
plasmid p3ABSDF
 
30012 165 aa conserved hypothetical protein
30013 M M2.Pae23095ORFAP (0% identity) ACTGGG M1.AbaSORF13P
30014 M M1.Pae23095ORFAP (0% identity) ACTGGG M2.AbaSORF13P
30015 R Pae23095ORFAP (0% identity) ACTGGG AbaSORF13P
30016 transposase of ISAba6, IS982 family
Orphan M
ORF Gene Most similar Specificity Name
 
Chromosome
 
2496 45 aa hypothetical protein; putative signal peptide
2497 M M.Aba118362ORF3010P (0% identity) GATC M.AbaSORF2497P
2498 309 aa conserved hypothetical protein