Escherichia coli RS218 |
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Putative Escherichia coli RS218 RM systems
Ref: Wijetunge,D.S.S. and Kariyawasam,S. unpublished
REBASE ref # 20102
Complete sequence: 5,087,638 bp
GenBank #: CP007149
REBASE acronym: Eco218
Org_num: 14440
All begin W817_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 25050 | endoribonuclease SymE | |||
| 25055 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco218ORF25060P |
| 25060 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.Eco218ORF25060P |
| 25065 | R | EcosS1ORF16790P (99% identity) | CCANNNNNNNCTTC | Eco218ORF25060P |
| 25070 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4615 | 75 aa hypothetical protein | |||
| 4620 | M | M.EcoRS218ORF2285P (100% identity) | GATC | M.Eco218ORF4620P |
| 4625 | pseudogene | |||
| 7480 | pseudogene | |||
| 7485 | M | M.SboBSORF1444P (100% identity) | M.Eco218ORF7485P | |
| 7505 | 75 aa hypothetical protein | |||
| 10025 | membrane protein | |||
| ??? | M | M.EcoVL02ORF18020P (99% identity) | M.Eco218ORF10030P | |
| 10035 | membrane protein | |||
| 11040 | multidrug transporter | |||
| 11045 | V | V.SflC32DcmP (74% identity) | V.Eco218DcmP | |
| 11050 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.Eco218DcmP |
| 11055 | hydrolase | |||
| 15055 | LexA family transcriptional regulator | |||
| 15060 | M | M.EcoY26ORF4515P (99% identity) | GATC | M.Eco218ORF15060P |
| 15065 | 164 aa hypothetical protein | |||
| 18390 | Fis family transcriptional regulator | |||
| 18395 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco218ORF18395P |
| 18400 | 59 aa hypothetical protein | |||
| 18995 | ribulose-phosphate 3-epimerase | |||
| 19000 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco218DamP |
| 19005 | cell division protein DamX | |||
| 22735 | 164 aa hypothetical protein | |||
| 22740 | M | M.EcoSCU487ORF7365P (99% identity) | GATC | M.Eco218ORF22740P |
| 22745 | SOS-response repressor and protease LexA | |||
| 22775 | 67 aa hypothetical protein | |||
| 22780 | M | M.Sso63633ORF22290P (100% identity) | M.Eco218ORF22780P | |
| 22785 | holin | |||
| 24490 | ATPase | |||
| 24495 | M | M.EcosS3ORF15775P (100% identity) | M.Eco218ORF24495P | |
| 24500 | 118 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25065 | DEAD/DEAH box helicase | |||
| 25070 | R | EcosS1MrrP (100% identity) | Eco218MrrP | |
| 25075 | GTP-binding protein YjiA | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6650 | 146 aa hypothetical protein | |||
| 6655 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco218ORF6655P |
| 6660 | NinE protein | |||