Geobacillus species 12AMOR1 |
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Putative Geobacillus species 12AMOR1 RM systems
Ref: Wissuwa,J. et al. unpublished
REBASE ref # 21467
| Sequence length: | GenBank #: | |
| Chromosome: | 3,410,035 bp | CP011832 |
| plasmid pGARCT: | 32,689 bp | CP011833 |
REBASE acronym: Gsp12
Org_num: 16029
All begin GARCT_, GARCT_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 209 | 195 aa hypothetical protein | |||
| 210 | R | Fth11526ORF2636P (100% identity) | Gsp12ORF211P | |
| 211 | M | M.Fth11526ORF2636P (100% identity) | M.Gsp12ORF211P | |
| 212 | 53 aa hypothetical protein | |||
| 213 | Transposase | |||
| 214 | 552 aa hypothetical protein | |||
| 215 | Transposase | |||
| 216 | S | S.Fth11526ORF2636P (100% identity) | S.Gsp12ORF211P | |
| 217 | 173 aa hypothetical protein | |||
| 388 | 80 aa hypothetical protein | |||
| 389 | M | Type I restriction enzyme EcoKI M protein | M.Gsp12ORF389AP | |
| 390 | Transposase IS66 family protein | |||
| 391 | M | M.Fth11526ORF3634P (49% identity) | M.Gsp12ORF389BP | |
| 392 | S | S.Fth11526ORF3634P (100% identity) | S.Gsp12ORF389P | |
| 393 | R | Gst458ORF341P (65% identity) | Gsp12ORF389AP | |
| 394 | Transposase IS116/IS110/IS902 family protein | |||
| 395 | R | 383 aa hypothetical protein | Gsp12ORF389BP | |
| 396 | pseudogene | |||
| 1708 | Copper resistance protein C precursor | |||
| 1709 | M | M1.GthORF2024P (99% identity) | CCANNNNNATC | M1.Gsp12II |
| 1710 | 211 aa hypothetical protein | |||
| 1711 | M | M.GspY4ORF1947P (98% identity) | CCANNNNNATC | M2.Gsp12II |
| 1712 | S | S.GsuKORF1045P (62% identity) | CCANNNNNATC | S.Gsp12II |
| 1713 | R | Gst60133ORF7195P (98% identity) | CCANNNNNATC | Gsp12IIP |
| 1714 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 858 | RNA polymerase-associated protein RapA | |||
| 859 | M | M.PthBH41ORF31980P (99% identity) | M.Gsp12ORF859P | |
| 860 | 1126 aa hypothetical protein | |||
| 1391 | 1232 aa hypothetical protein | |||
| 1392 | M | M.GspE263ORFDP (64% identity) | M.Gsp12ORF1392P | |
| 1393 | PglZ domain protein | |||
| 2573 | Single-stranded DNA-binding protein ssb | |||
| 2574 | M | M.AspUARKORF270P (56% identity) | M.Gsp12ORF2574P | |
| 2575 | HNH endonuclease | |||
| plasmid pGARCT | ||||
| 3 | 97 aa hypothetical protein | |||
| 4 | M | M.Gza12ORF17800P (100% identity) | GCWGC | M.Gsp12ORF4P |
| 5 | R | Gza12ORF17800P (100% identity) | GCWGC | Gsp12ORF4P |
| 6 | 158 aa hypothetical protein | |||
| ??? | V | V.Gza12ORF17800P (90% identity) | V.Gsp12ORF4P | |
| 8 | Tyrosine recombinase XerC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1422 | RecBCD enzyme subunit RecD | |||
| 1423 | M | M.Fth11526II (100% identity) | GCCAT | M.Gsp12I |
| 1424 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1395 | RNA polymerase-associated protein RapA | |||
| 1396 | R | GspZGt1MrrP (93% identity) | Gsp12MrrP | |
| 1397 | Transposase DDE domain protein | |||