Brocadia sinica JPN1 |
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Putative Brocadia sinica JPN1 RM systems
Ref: Oshiki,M. et al. unpublished
REBASE ref # 19590
GenBank #: BAFN00000000
REBASE acronym: BsiJPN1
Org_num: 15571
All begin BROSI_A, BROSI_C
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1177 | electron transfer flavoprotein alpha subunit | |||
| 1178 | M | M.SspE70ORFAP (54% identity) | M.BsiJPN1ORF1178P | |
| 1179 | type I restriction-modification system | |||
| 1180 | 76 aa hypothetical protein | |||
| 1181 | nucleic acid-binding protein contains PIN | |||
| 1182 | S | S.Wvi11635I (31% identity) | S1.BsiJPN1ORF1178P | |
| 1183 | S | S.CfiYT5ORF6550P (24% identity) | S2.BsiJPN1ORF1178P | |
| 1184 | virulence protein-like protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14 | 32 aa hypothetical protein | |||
| ??? | M | M.SspB29ORF13120P (40% identity) | M.BsiJPN1ORFAP | |
| 15 | 387 aa hypothetical protein | |||
| 58 | aspartyl/asparaginyl-tRNA synthetases | |||
| 59 | M | M.BsiJPN1ORF3689P (74% identity) | M.BsiJPN1ORF59P | |
| 60 | 286 aa hypothetical protein | |||
| 388 | 60 aa hypothetical protein | |||
| 389 | M | M.BsiJPN1ORF3689P (66% identity) | M.BsiJPN1ORF389P | |
| 390 | 62 aa hypothetical protein | |||
| 1098 | 139 aa hypothetical protein | |||
| 1099 | M | M.PmeK22ORF413P (49% identity) | M.BsiJPN1ORF1099P | |
| 1100 | protein contains DUF433 domain | |||
| 1196 | ribosomal protein S21 | |||
| 1197 | M | M.BspG2I (62% identity) | CAGCTG | M.BsiJPN1ORF1197P |
| 1198 | 213 aa hypothetical protein | |||
| 1403 | 338 aa hypothetical protein | |||
| 1404 | M | transcriptional activator adenine-specific DNA | M.BsiJPN1ORF1404P | |
| 1405 | 59 aa hypothetical protein | |||
| 1407 | 86 aa hypothetical protein | |||
| 1408 | R | CulEspORF2170007P (28% identity) | BsiJPN1ORF1408P | |
| 1409 | 79 aa hypothetical protein | |||
| 1721 | 146 aa hypothetical protein | |||
| 1722 | RM | Bsp40ORFMP (81% identity) | BsiJPN1ORF1722P | |
| 1723 | filamentation induced by cAMP protein Fic | |||
| 2725 | 240 aa hypothetical protein | |||
| 2726 | R | Aac101CORFEP (26% identity) | ACNNNNNCTCC | BsiJPN1ORF2727P |
| 2727 | M | M.Swo4J5ORFHP (44% identity) | ACNNNNNCTCC | M.BsiJPN1ORF2727P |
| 2728 | 84 aa hypothetical protein | |||
| 2832 | uncharacterized conserved protein | |||
| 2833 | R | Aba078ORF7095P (68% identity) | BsiJPN1ORF2834P | |
| 2834 | M | M.Aba078ORF7095P (66% identity) | CCCGGG | M.BsiJPN1ORF2834P |
| 2835 | 81 aa hypothetical protein | |||
| 3153 | major facilitator superfamily MFS_1 | |||
| 3154 | R | SspD17ORF1745P (68% identity) | CTGCAG | BsiJPN1ORF3155P |
| 3155 | M | M.SspD17ORF1745P (57% identity) | CTGCAG | M.BsiJPN1ORF3155P |
| 3156 | 118 aa hypothetical protein | |||
| 3452 | pseudouridylate synthases 23S rRNA-specific | |||
| 3453 | M | M.KstMBR1ORF292P (40% identity) | M.BsiJPN1ORF3453P | |
| 3454 | 81 aa hypothetical protein | |||
| 3688 | 67 aa hypothetical protein | |||
| 3689 | M | M.BsiJPN1ORF59P (74% identity) | M.BsiJPN1ORF3689P | |
| 3690 | 300 aa hypothetical protein | |||
| 3884 | transcription regulator | |||
| 3885 | R | MoxORF3047P (77% identity) | CTCGAG | BsiJPN1ORF3886P |
| 3886 | M | M.SarUORFFP (75% identity) | CTCGAG | M.BsiJPN1ORF3886P |
| 3887 | deoxyguanosinetriphosphate triphosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1319 | 94 aa hypothetical protein | |||
| 1320 | M | M.BspG2ORFJP (56% identity) | M.BsiJPN1ORF1320P | |
| 1321 | 49 aa hypothetical protein | |||
| 1322 | 143 aa hypothetical protein | |||
| 1323 | R | MspH1ORFDP (76% identity) | BsiJPN1ORF1320P | |
| 1324 | 185 aa hypothetical protein | |||
| 1648 | type III restriction protein res subunit | |||
| ??? | M | M.Aba5003ORF5760P (43% identity) | M.BsiJPN1ORF1649P | |
| 1651 | NAD-dependent protein deacetylases SIR2 family | |||
| 1729 | dolichol-phosphate mannosyltransferase | |||
| 1730 | R | KstMBR1ORF3727P (80% identity) | BsiJPN1ORF1735P | |
| 1731 | cytoplasmic protein | |||
| 1732 | endonuclease containing a URI domain | |||
| 1733 | cytoplasmic protein | |||
| 1734 | 145 aa hypothetical protein | |||
| 1735 | M | M.JspAM49ORF12890P (71% identity) | M.BsiJPN1ORF1735P | |
| 1736 | 299 aa hypothetical protein | |||
| 2155 | site-specific recombinase | |||
| 2156 | R | KspPM38ORF1455P (55% identity) | BsiJPN1ORF2159P | |
| 2157 | 143 aa hypothetical protein | |||
| 2158 | ERCC4-like helicases | |||
| 2159 | M | M.Aac446ORF3086P (47% identity) | M.BsiJPN1ORF2159P | |
| 2160 | ubiquinone biosynthesis protein | |||
| 2349 | 31 aa hypothetical protein | |||
| ??? | M | M.Mso21ORFCP (52% identity) | M.BsiJPN1ORF2350P | |
| 2352 | 431 aa hypothetical protein | |||
| 3482 | 154 aa hypothetical protein | |||
| ??? | M | M.Bsp40ORFIP (62% identity) | M.BsiJPN1ORF3483P | |
| 3485 | 144 aa hypothetical protein | |||
| 3486 | NCAIR mutase-related protein | |||
| 3487 | 1043 aa hypothetical protein | |||
| 3488 | 59 aa hypothetical protein | |||
| 3489 | 152 aa hypothetical protein | |||
| 3490 | R | Bsp40ORFIP (81% identity) | BsiJPN1ORF3483P | |
| 3491 | S-adenosylmethionine:tRNA | |||