Haemophilus influenzae Hi403 |
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Putative Haemophilus influenzae Hi403 RM systems
Ref: Giufre,M. et al. Genome Announc 3 (2) (2015)
REBASE ref # 19562
Contig set: 1,870,733 bp
GenBank #: JXME00000000 (NZ_JXME00000000)
REBASE acronym: Hin403
Org_num: 15676
All begin SU56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7175 | translation initiation factor IF-2 | |||
| 7180 | R | HinP3EMOORF3665P (100% identity) | Hin403ORF7195P | |
| 7185 | 212 aa hypothetical protein | |||
| 7190 | S | S.HinP3EMOORF3665P (100% identity) | S.Hin403ORF7195P | |
| 7195 | M | M.Hin12975ORF1285P (100% identity) | M.Hin403ORF7195P | |
| 7200 | ribosome-binding factor A | |||
| 3635 | signal recognition particle | |||
| 3640 | R | HinII3ORF8910P (100% identity) | Hin403ORF3655P | |
| 3645 | S | S.HinP3EMOORF6585P (100% identity) | S.Hin403ORF3655P | |
| 3650 | ATPase | |||
| 3655 | M | M.HinP3EMOORF6585P (100% identity) | M.Hin403ORF3655P | |
| 3660 | metal-binding protein | |||
| 3435 | oligopeptidase A | |||
| 3440 | M | M.HinP3EMOORF7185P (100% identity) | M.Hin403ORF3440P | |
| 3445 | S | S.HinP3EMOORF7185P (100% identity) | S.Hin403ORF3440P | |
| 3450 | anticodon nuclease | |||
| 3455 | 2-hydroxyacid dehydrogenase | |||
| 3460 | R | HinP3EMOORF7185P (100% identity) | Hin403ORF3440P | |
| 3465 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1130 | DNA-binding protein | |||
| 1135 | M | M.HinP3EMOORF4195P (100% identity) | GTCGAC | M.Hin403ORF1135P |
| 1140 | R | R2.HinP3EMOORF4195P (100% identity) | GTCGAC | Hin403ORF1135P |
| 1145 | 364 aa hypothetical protein | |||
| 1235 | antirepressor | |||
| 1240 | M | M.HinY40ORF16330P (100% identity) | M.Hin403ORF1240P | |
| 1245 | 114 aa hypothetical protein | |||
| 8960 | valyl-tRNA synthetase | |||
| 8965 | R | HinIII8ORF12360P (100% identity) | AAGCTT | Hin403ORF8970P |
| 8970 | M | M.HinIII8ORF12360P (100% identity) | AAGCTT | M.Hin403ORF8970P |
| 8975 | valine--tRNA ligase | |||
| 9075 | condesin subunit E | |||
| 9080 | R | HinP3EMOORF3885P (100% identity) | RGCGCY | Hin403ORF9085P |
| 9085 | M | M.HinKR271ORF1213P (100% identity) | RGCGCY | M.Hin403ORF9085P |
| 9090 | condesin subunit F | |||
| 1065 | 160 aa hypothetical protein | |||
| 1070 | M | M.Hin394ORF7420P (99% identity) | M.Hin403ORF1070P | |
| 1075 | 119 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5960 | 113 aa hypothetical protein | |||
| 5965 | R | HinII7ORF17560P (100% identity) | Hin403ORF5970P | |
| 5970 | M | M.HinII3ORF16980P (100% identity) | M.Hin403ORF5970P | |
| 5975 | ribonuclease HII | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3405 | 3-dehydroquinate synthase | |||
| 3410 | M | M.HinP3EMOORF7155P (100% identity) | GATC | M.Hin403ORF3410P |
| 3415 | phosphatidylglycerophosphatase | |||