Haemophilus influenzae RMHi93 |
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Putative Haemophilus influenzae RMHi93 RM systems
Ref: Giufre,M. et al. Genome Announc 3 (2) (2015)
REBASE ref # 19562
Contig set: 1,935,599 bp
GenBank #: JXMH00000000 (NZ_JXMH00000000)
REBASE acronym: Hin93
Org_num: 15679
All begin SU59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5315 | membrane protein | |||
| 5320 | R | Hin322ORF4985P (100% identity) | Hin93ORF5350P | |
| 5325 | DNA-binding protein | |||
| 5330 | 176 aa hypothetical protein | |||
| 5335 | S | S.Hin21384ORF5145P (67% identity) | S.Hin93ORF5350P | |
| 5340 | pseudogene | |||
| 5345 | RlfA protein | |||
| 5350 | M | M.Hin322ORF4985P (100% identity) | M.Hin93ORF5350P | |
| 5355 | oligopeptidase A | |||
| 2235 | translation initiation factor IF-2 | |||
| 2240 | R | Hin322ORF3770P (100% identity) | Hin93ORF2250P | |
| ??? | S | S.Hin322ORF3770P (100% identity) | S.Hin93ORF2250P | |
| 2250 | M | M.Hin322ORF3770P (100% identity) | M.Hin93ORF2250P | |
| 2255 | ribosome-binding factor A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7595 | M | M.Hin93ORF540P (71% identity) | GCSGC | M.Hin93ORF7595P |
| 7600 | XRE family transcriptional regulator | |||
| 540 | M | M.Hin322ORF3700P (100% identity) | GCSGC | M.Hin93ORF540P |
| 545 | R | Hin322ORF3700P (100% identity) | GCSGC | Hin93ORF540P |
| 550 | pseudogene | |||
| 775 | replication P | |||
| 780 | M | M.HinIV1ORF14580P (100% identity) | GATC | M.Hin93ORF780P |
| 785 | 146 aa hypothetical protein | |||
| 5845 | Mu-like prophage FluMu protein com | |||
| 5850 | M | M.Hin322ORF1825P (100% identity) | M.Hin93ORF5850P | |
| 5855 | 148 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 75 | peptidylprolyl isomerase | |||
| 80 | M | M.Hin1374ORF6970P (100% identity) | M.Hin93ORF80P | |
| 85 | R | Hin1209ORF46P (99% identity) | Hin93ORF80P | |
| 90 | RNase E inhibitor protein | |||
| 4065 | 113 aa hypothetical protein | |||
| 4070 | R | Hin1209IP (100% identity) | Hin93ORF4075P | |
| ??? | M | M.Hin1374ORF925P (96% identity) | M.Hin93ORF4075P | |
| 4085 | ribonuclease HII | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5375 | phosphatidylglycerophosphatase | |||
| 5380 | M | M.HinIII8ORF7930P (100% identity) | GATC | M.Hin93ORF5380P |
| 5385 | 3-dehydroquinate synthase | |||