Haemophilus influenzae MiHi64 |
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Putative Haemophilus influenzae MiHi64 RM systems
Ref: Giufre,M. et al. Genome Announc 3 (2) (2015)
REBASE ref # 19562
Contig set: 1,979,464 bp
GenBank #: JXMG00000000 (NZ_JXMG00000000)
REBASE acronym: Hin64
Org_num: 15678
All begin SU58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 400 | R | Hin7858ORF7000P (84% identity) | Hin64ORF400P | |
| 405 | 77 aa hypothetical protein CGSHiGG_01545 | |||
| 410 | 75 aa hypothetical protein, partial | |||
| 415 | 174 aa hypothetical protein | |||
| 420 | S | S.Hin7858ORF7000P (48% identity) | S.Hin64ORF400P | |
| 2285 | oligopeptidase A | |||
| 2290 | M | M.Hin345ORF8190P (99% identity) | M.Hin64ORF2290P | |
| 2295 | S | S.HinIII4ORF8150P (100% identity) | S.Hin64ORF2290P | |
| 2300 | anticodon nuclease | |||
| 2305 | 2-hydroxyacid dehydrogenase | |||
| 2310 | R | HinIII4ORF8150P (99% identity) | Hin64ORF2290P | |
| 2315 | membrane protein | |||
| 5885 | ribosome-binding factor A | |||
| 5890 | M | M.HinIII5ORF11700P (99% identity) | M.Hin64ORF5890P | |
| 5895 | S | S.HinR535ORF90P (100% identity) | S.Hin64ORF5890P | |
| 5900 | 345 aa hypothetical protein | |||
| 5905 | R | HinR535ORF90P (84% identity) | Hin64ORF5890P | |
| 7600 | signal recognition particle | |||
| 7605 | R | HinR535ORF4005P (99% identity) | Hin64ORF7620P | |
| 7610 | S | S.HinR535ORF4005P (100% identity) | S.Hin64ORF7620P | |
| 7615 | ATPase | |||
| 7620 | M | M.HinR535ORF4005P (100% identity) | M.Hin64ORF7620P | |
| 7625 | metal-binding protein | |||
| 5080 | translation initiation factor IF-2 | |||
| 5085 | R | restriction endonuclease HindVIIP subunit R | Hin64ORF5085P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 930 | 78 aa hypothetical protein | |||
| 935 | S | S.Hin7858ORF7195P (100% identity) | S.Hin64ORF940P | |
| 940 | RM | 676 aa hypothetical protein | Hin64ORF940P | |
| 945 | molybdenum-pterin-binding protein | |||
| 615 | pseudogene | |||
| 620 | M | M.Hin7858ORF9510P (100% identity) | GRCGYC | M.Hin64ORF620P |
| 625 | R | Hin7858ORF9510P (93% identity) | GRCGYC | Hin64ORF620P |
| 630 | ATPase | |||
| 1000 | 470 aa hypothetical protein | |||
| 1005 | R | HinR2846ORFBP (100% identity) | Hin64ORF1010P | |
| 1010 | M | M.HinR2846ORFBP (100% identity) | M.Hin64ORF1010P | |
| 1015 | transposase | |||
| 6270 | 774 aa hypothetical protein | |||
| 6275 | R | Hin7858ORF4435P (100% identity) | Hin64ORF6280P | |
| 6280 | M | M.Hin7858ORF4435P (100% identity) | M.Hin64ORF6280P | |
| 6285 | pseudogene | |||
| 4540 | 3-phosphoshikimate 1-carboxyvinyltransferase | |||
| 4545 | M | M.HinR535ORF5230P (100% identity) | CGCG | M.Hin64ORF4545P |
| 4550 | R | HinR535ORF5230P (100% identity) | CGCG | Hin64ORF4545P |
| 4555 | recombination factor protein RarA | |||
| 8535 | 87 aa hypothetical protein | |||
| 8540 | M | M.Hin7858ORF5950P (100% identity) | BA | M.Hin64ORF8540P |
| 8545 | Mu-like prophage FluMu protein com | |||
| 8730 | 76 aa hypothetical protein | |||
| 8735 | M | M.Hin7858ORF6145P (99% identity) | M.Hin64ORF8735P | |
| 8740 | FMN-dependent NADH-azoreductase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 390 | R | type III restriction-modification system HindVIP | Hin64ORF395P | |
| 395 | M | M.HinR535ORF5085P (76% identity) | M.Hin64ORF395P | |
| 7260 | 113 aa hypothetical protein | |||
| 7265 | R | Hin7858ORF9435P (99% identity) | Hin64ORF7270P | |
| ??? | M | M.Hin7858ORF9435P (98% identity) | M.Hin64ORF7270P | |
| 7280 | ribonuclease HII | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2250 | 3-dehydroquinate synthase | |||
| 2255 | M | M.HinIII8ORF7930P (100% identity) | GATC | M.Hin64ORF2255P |
| 2260 | phosphatidylglycerophosphatase | |||