Vibrio parahaemolyticus 10-4298 |
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Putative Vibrio parahaemolyticus 10-4298 RM systems
Ref: Ronholm,J. et al. Genome Announc 3 (2) (2015)
REBASE ref # 19537
Contig set: 5,233,482 bp
GenBank #: JXUZ00000000 (NZ_JXUZ00000000)
REBASE acronym: Vpa4298
Org_num: 15691
All begin SZ13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 860 | M | M.VpaS1ORFAP (78% identity) | M.Vpa4298ORF860P | |
| 865 | 132 aa hypothetical protein | |||
| 870 | translation elongation factor Ts | |||
| 875 | 78 aa hypothetical protein | |||
| 880 | DNA methylase N-4 | |||
| 885 | R | VpaLVP2ORF15560P (99% identity) | Vpa4298ORF860P | |
| 890 | 806 aa hypothetical protein | |||
| 21785 | M | M.Vvu053ORF884P (17% identity) | M.Vpa4298ORF21785P | |
| 21790 | S | S.Dsp2B12ORFAP (72% identity) | S.Vpa4298ORF21785P | |
| 21795 | membrane protein | |||
| 21875 | M | restriction endonuclease EcoEI subunit M | M.Vpa4298ORF21875P | |
| 21880 | S | S.VvuDJHORF13440P (71% identity) | S.Vpa4298ORF21875P | |
| 21885 | membrane protein | |||
| 10315 | R | VvuBAA87ORF18740P (97% identity) | Vpa4298ORF10335P | |
| 10320 | transposase | |||
| 10325 | 312 aa hypothetical protein | |||
| 10330 | multidrug transporter | |||
| 10335 | M | M.VphR14ORF14160P (78% identity) | M.Vpa4298ORF10335P | |
| 6290 | 76 aa hypothetical protein | |||
| ??? | M | M.VpaMAVP26ORF8575P (100% identity) | M.Vpa4298ORF6295P | |
| 6300 | damage-inducible protein D | |||
| 6305 | 98 aa hypothetical protein | |||
| 6310 | S | S.Vpas10329ORF3030P (100% identity) | S.Vpa4298ORF6295P | |
| 6315 | R | Vpas10329ORF3030P (100% identity) | Vpa4298ORF6295P | |
| 6320 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 875 | 78 aa hypothetical protein | |||
| 880 | M | M.VpaTJ187ORF1840P (99% identity) | M.Vpa4298ORF880P | |
| 885 | DEAD/DEAH box helicase | |||
| 5845 | ribulose-phosphate 3-epimerase | |||
| 5850 | M | M.Vpas10329DamP (100% identity) | GATC | M.Vpa4298DamP |
| 5855 | cell division protein DamX | |||
| 11080 | 374 aa hypothetical protein | |||
| 11085 | M | M.Val10675ORF2112P (87% identity) | M.Vpa4298ORF11085P | |
| 11090 | 69 aa hypothetical protein | |||
| 20715 | 157 aa hypothetical protein | |||
| 20720 | M | M.Vpas10329ORF1865P (100% identity) | M.Vpa4298ORF20720P | |
| 20725 | R | Vpas10329ORF1860P (100% identity) | Vpa4298ORF20720P | |
| 20730 | integrase | |||